FFCP PHASE1:Hg19::chr14:89259409..89259419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:89259409..89259419,+ | |||
|description=CAGE_peak_at_chr14:89259409..89259419,+ | |description=CAGE_peak_at_chr14:89259409..89259419,+ | ||
|id=chr14:89259409..89259419,+ | |id=chr14:89259409..89259419,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!1.20e-08!6;DOID:171!1.81e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:5093;9.45e-18;4!DOID:1612;9.45e-18;4!DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.69e-18,4;DOID:1612,8.69e-18,4;DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.39e-23!57;UBERON:0005068!3.39e-23!57;UBERON:0006241!3.39e-23!57;UBERON:0007135!3.39e-23!57;UBERON:0000073!2.07e-21!94;UBERON:0001016!2.07e-21!94;UBERON:0001017!1.36e-18!82;UBERON:0002616!4.13e-18!59;UBERON:0000955!1.40e-17!69;UBERON:0006238!1.40e-17!69;UBERON:0005743!2.02e-17!86;UBERON:0002780!6.51e-16!41;UBERON:0001890!6.51e-16!41;UBERON:0006240!6.51e-16!41;UBERON:0003080!1.92e-15!42;UBERON:0002020!2.97e-15!34;UBERON:0003528!2.97e-15!34;UBERON:0002346!3.98e-15!90;UBERON:0003075!9.54e-15!86;UBERON:0007284!9.54e-15!86;UBERON:0007023!1.17e-11!115;UBERON:0002791!1.91e-11!33;UBERON:0002308!3.16e-11!9;UBERON:0000125!3.16e-11!9;UBERON:0001893!4.92e-11!34;UBERON:0003056!8.54e-11!61;UBERON:0000924!9.12e-11!173;UBERON:0006601!9.12e-11!173;UBERON:0000013!2.19e-10!5;UBERON:0002410!2.19e-10!5;UBERON:0004121!2.34e-10!169;UBERON:0001869!4.70e-10!32;UBERON:0000349!4.90e-10!5;UBERON:0006331!7.03e-10!3;UBERON:0003076!3.42e-09!15;UBERON:0003057!3.42e-09!15;UBERON:0002619!9.31e-09!22;UBERON:0000153!1.87e-08!129;UBERON:0007811!1.87e-08!129;UBERON:0002680!2.16e-08!9;UBERON:0001895!2.16e-08!9;UBERON:0010092!2.16e-08!9;UBERON:0000033!2.74e-08!123;UBERON:0002420!8.80e-08!9;UBERON:0007245!8.80e-08!9;UBERON:0010009!8.80e-08!9;UBERON:0010011!8.80e-08!9;UBERON:0000454!8.80e-08!9;UBERON:0001954!1.38e-07!2;UBERON:0003022!1.38e-07!2;UBERON:0002421!1.38e-07!2;UBERON:0002600!1.38e-07!2;UBERON:0000956!1.49e-07!25;UBERON:0000203!1.49e-07!25;UBERON:0002148!2.01e-07!2;UBERON:0009662!2.01e-07!2;UBERON:0001894!3.64e-07!7;UBERON:0006222!3.64e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;5.96e-34;2!UBERON:0003022;5.96e-34;2!UBERON:0002421;5.96e-34;2!UBERON:0002600;5.96e-34;2!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000349;1.71e-14;5!UBERON:0000010;1.04e-08;8!UBERON:0000310;6.34e-08;10!UBERON:0001443;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,7.05e-34,2;UBERON:0003022,7.05e-34,2;UBERON:0002421,7.05e-34,2;UBERON:0002600,7.05e-34,2;UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000349,1.83e-14,5;UBERON:0000010,1.04e-08,8;UBERON:0000310,6.13e-08,10;UBERON:0001443,2.47e-07,11 | |||
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| ||
|short_description=p@chr14:89259409..89259419,+ | |short_description=p@chr14:89259409..89259419,+ | ||
}} | }} |
Latest revision as of 23:25, 24 July 2015
Short description: | p@chr14:89259409..89259419, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:89259409..89259419, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 7.05e-34 | 2 |
lobe parts of cerebral cortex | 7.05e-34 | 2 |
hippocampal formation | 7.05e-34 | 2 |
limbic lobe | 7.05e-34 | 2 |
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
limbic system | 1.83e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
breast | 6.13e-08 | 10 |
chest | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.69e-18 | 4 |
breast cancer | 8.69e-18 | 4 |
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |