FFCP PHASE1:Hg19::chr10:9018232..9018237,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:9018232..9018237,- | |||
|description=CAGE_peak_at_chr10:9018232..9018237,- | |description=CAGE_peak_at_chr10:9018232..9018237,- | ||
|id=chr10:9018232..9018237,- | |id=chr10:9018232..9018237,- | ||
|ontology_enrichment_celltype=CL:0000791!3.85e-18!18;CL:0000789!3.85e-18!18;CL:0002420!3.85e-18!18;CL:0002419!3.85e-18!18;CL:0000790!3.85e-18!18;CL:0000624!8.21e-16!6;CL:0000084!3.22e-12!25;CL:0000827!3.22e-12!25;CL:0000898!2.12e-08!3;CL:0002541!8.93e-08!3;CL:0000625!1.24e-07!11 | |ontology_enrichment_celltype=CL:0000791!3.85e-18!18;CL:0000789!3.85e-18!18;CL:0002420!3.85e-18!18;CL:0002419!3.85e-18!18;CL:0000790!3.85e-18!18;CL:0000624!8.21e-16!6;CL:0000084!3.22e-12!25;CL:0000827!3.22e-12!25;CL:0000898!2.12e-08!3;CL:0002541!8.93e-08!3;CL:0000625!1.24e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000624;3.70e-21;6!CL:0000791;4.69e-15;18!CL:0000789;4.69e-15;18!CL:0002419;4.69e-15;18!CL:0000084;1.05e-10;25!CL:0002537;2.62e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.67e-21,6;CL:0000791,5.87e-15,18;CL:0000789,5.87e-15,18;CL:0002420,5.87e-15,18;CL:0002419,5.87e-15,18;CL:0000790,5.87e-15,18;CL:0000084,1.23e-10,25;CL:0000827,1.23e-10,25;CL:0002537,2.54e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;4.69e-15;18!UBERON:0008425;1.67e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.37e-09;4!DOID:1612;4.37e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.37e-09,4;DOID:1612,4.37e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!8.93e-08!3;UBERON:0000920!8.93e-08!3 | |ontology_enrichment_uberon=UBERON:0000476!8.93e-08!3;UBERON:0000920!8.93e-08!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,1.6194683300949,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73748563216283,3.14408610199332,3.08402248499264,0,0.32592226663359,0,0,5.45911238737351,2.3568472597987,0.443067789167242,2.97884250141517,2.43373507478783,2.73124629875744,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0,0.766440987203842,1.03088233644789,1.01207876807801,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,2.01606743224732,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862510299438069,0.641715181398742,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0,6.75753544618311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.89625492123886,9.35821999959294,0,0,6.86484855790469,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,3.62972148145992,0.30607276163049,0,0.150323419414493,0,0,0,0,0,1.13843818411917,0,0,0.489961987071888,0,0,0.171986032471617,0,0,0,0,0,0,0,0.993573058514948,0,0,1.36269994427607,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,0,1.07185652062471,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,1.6194683300949,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73748563216283,3.14408610199332,3.08402248499264,0,0.32592226663359,0,0,5.45911238737351,2.3568472597987,0.443067789167242,2.97884250141517,2.43373507478783,2.73124629875744,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0,0.766440987203842,1.03088233644789,1.01207876807801,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,2.01606743224732,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862510299438069,0.641715181398742,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0,6.75753544618311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.89625492123886,9.35821999959294,0,0,6.86484855790469,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,3.62972148145992,0.30607276163049,0,0.150323419414493,0,0,0,0,0,1.13843818411917,0,0,0.489961987071888,0,0,0.171986032471617,0,0,0,0,0,0,0,0.993573058514948,0,0,1.36269994427607,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0.80057074828547,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,0,1.07185652062471,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:9018232..9018237,- | |short_description=p@chr10:9018232..9018237,- | ||
}} | }} |
Latest revision as of 16:27, 23 July 2015
Short description: | p@chr10:9018232..9018237, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:9018232..9018237, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.67e-21 | 6 |
mature alpha-beta T cell | 5.87e-15 | 18 |
alpha-beta T cell | 5.87e-15 | 18 |
immature T cell | 5.87e-15 | 18 |
mature T cell | 5.87e-15 | 18 |
immature alpha-beta T cell | 5.87e-15 | 18 |
T cell | 1.23e-10 | 25 |
pro-T cell | 1.23e-10 | 25 |
amnion mesenchymal stem cell | 2.54e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.37e-09 | 4 |
breast cancer | 4.37e-09 | 4 |