FFCP PHASE1:Hg19::chr15:33024167..33024179,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26585 | |EntrezGene=26585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |HGNC=2001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_AL359060_5end | |association_with_transcript=29bp_to_AL359060_5end | ||
|cluster_id=chr15:33024167..33024179,+ | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_18_at_GREM1_5end | |description=CAGE_peak_18_at_GREM1_5end | ||
|id=chr15:33024167..33024179,+ | |id=chr15:33024167..33024179,+ | ||
|ontology_enrichment_celltype=CL:0000057!7.56e-30!75;CL:0000055!1.05e-28!180;CL:0002334!1.61e-17!12;CL:0000048!7.54e-17!430;CL:0000723!3.29e-16!436;CL:0002620!3.30e-16!23;CL:0000034!6.31e-16!444;CL:0002320!2.81e-11!365;CL:0002371!8.17e-11!591;CL:0000134!1.82e-10!358;CL:0000144!7.16e-10!625;CL:0000219!5.46e-09!390;CL:0000548!6.46e-08!679;CL:0000004!6.46e-08!679;CL:0000255!6.46e-08!679;CL:0000012!9.82e-08!682;CL:0000680!1.10e-07!57;CL:0000056!1.10e-07!57;CL:0000355!1.10e-07!57;CL:0002552!3.52e-07!5 | |ontology_enrichment_celltype=CL:0000057!7.56e-30!75;CL:0000055!1.05e-28!180;CL:0002334!1.61e-17!12;CL:0000048!7.54e-17!430;CL:0000723!3.29e-16!436;CL:0002620!3.30e-16!23;CL:0000034!6.31e-16!444;CL:0002320!2.81e-11!365;CL:0002371!8.17e-11!591;CL:0000134!1.82e-10!358;CL:0000144!7.16e-10!625;CL:0000219!5.46e-09!390;CL:0000548!6.46e-08!679;CL:0000004!6.46e-08!679;CL:0000255!6.46e-08!679;CL:0000012!9.82e-08!682;CL:0000680!1.10e-07!57;CL:0000056!1.10e-07!57;CL:0000355!1.10e-07!57;CL:0002552!3.52e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.11e-21;23!CL:0002334;1.82e-20;12!CL:0000135;3.18e-11;3!CL:0000388;3.18e-11;3!CL:0002579;5.16e-11;3!CL:0000057;1.05e-10;73!CL:0002580;1.19e-10;3!CL:0000197;5.79e-09;6!CL:0000098;5.79e-09;6!CL:0002167;5.79e-09;6!CL:0002617;1.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.48e-33,76;CL:0002620,8.01e-21,23;CL:0002334,1.95e-20,12;CL:0000135,3.60e-11,3;CL:0000388,3.60e-11,3;CL:0002579,5.55e-11,3;CL:0002580,9.41e-11,3;CL:0000048,9.47e-10,427;CL:0000134,1.09e-09,354;CL:0000723,1.91e-09,433;CL:0002320,2.74e-09,361;CL:0000034,4.69e-09,441;CL:0000197,9.77e-09,6;CL:0000098,9.77e-09,6;CL:0002167,9.77e-09,6;CL:0000219,1.61e-08,386;CL:0002617,9.24e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.53e-09!14;DOID:17!5.43e-09!5;DOID:450!5.43e-09!5;DOID:66!5.43e-09!5;DOID:423!5.43e-09!5;DOID:0080000!5.43e-09!5;DOID:11722!5.43e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.08e-16;5!DOID:450;2.08e-16;5!DOID:66;2.08e-16;5!DOID:423;2.08e-16;5!DOID:0080000;2.08e-16;5!DOID:11722;2.08e-16;5!DOID:2394;1.26e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.68e-16,5;DOID:450,1.68e-16,5;DOID:66,1.68e-16,5;DOID:423,1.68e-16,5;DOID:0080000,1.68e-16,5;DOID:11722,1.68e-16,5;DOID:2394,1.18e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.39e-14!45;UBERON:0002416!6.39e-14!45;UBERON:0002097!1.54e-13!40;UBERON:0003102!1.15e-12!95;UBERON:0002384!5.95e-12!375;UBERON:0000914!1.88e-09!83;UBERON:0002329!1.88e-09!83;UBERON:0003077!1.88e-09!83;UBERON:0003059!1.88e-09!83;UBERON:0007282!1.88e-09!83;UBERON:0009618!1.88e-09!83;UBERON:0007285!1.88e-09!83;UBERON:0004290!5.04e-08!70;UBERON:0000992!6.65e-08!13;UBERON:0003688!5.91e-07!6;UBERON:0002358!5.91e-07!6;UBERON:0003684!5.91e-07!6;UBERON:0001178!5.91e-07!6;UBERON:0001134!8.36e-07!61;UBERON:0002036!8.36e-07!61;UBERON:0003082!8.36e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.72e-13;41!UBERON:0007846;3.18e-11;3!UBERON:0000043;3.18e-11;3!UBERON:0007845;3.18e-11;3!UBERON:0002199;1.65e-10;46!UBERON:0002416;1.65e-10;46!UBERON:0003102;2.95e-08;50!UBERON:0000310;4.46e-08;10!UBERON:0005406;1.28e-07;2!UBERON:0001443;2.62e-07;11!UBERON:0002384;5.25e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.74e-16,41;UBERON:0002199,3.16e-16,46;UBERON:0002416,3.16e-16,46;UBERON:0003102,2.07e-12,99;UBERON:0007846,3.60e-11,3;UBERON:0000043,3.60e-11,3;UBERON:0007845,3.60e-11,3;UBERON:0002384,1.90e-09,371;UBERON:0000310,3.24e-08,10;UBERON:0005406,1.20e-07,2;UBERON:0001443,1.97e-07,11 | |||
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|short_description=p18@GREM1 | |short_description=p18@GREM1 | ||
}} | }} |
Latest revision as of 04:50, 17 September 2015
Short description: | p18@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 29bp_to_AL359060_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.48e-33 | 76 |
skin fibroblast | 8.01e-21 | 23 |
preadipocyte | 1.95e-20 | 12 |
fibrocyte | 3.60e-11 | 3 |
tendon cell | 3.60e-11 | 3 |
omentum preadipocyte | 5.55e-11 | 3 |
preadipocyte of the breast | 9.41e-11 | 3 |
multi fate stem cell | 9.47e-10 | 427 |
mesenchymal cell | 1.09e-09 | 354 |
somatic stem cell | 1.91e-09 | 433 |
connective tissue cell | 2.74e-09 | 361 |
stem cell | 4.69e-09 | 441 |
receptor cell | 9.77e-09 | 6 |
sensory epithelial cell | 9.77e-09 | 6 |
olfactory epithelial cell | 9.77e-09 | 6 |
motile cell | 1.61e-08 | 386 |
adipocyte of breast | 9.24e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.74e-16 | 41 |
integument | 3.16e-16 | 46 |
integumental system | 3.16e-16 | 46 |
surface structure | 2.07e-12 | 99 |
dense regular connective tissue | 3.60e-11 | 3 |
tendon | 3.60e-11 | 3 |
regular connective tissue | 3.60e-11 | 3 |
connective tissue | 1.90e-09 | 371 |
breast | 3.24e-08 | 10 |
perirenal fat | 1.20e-07 | 2 |
chest | 1.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.68e-16 | 5 |
myotonic disease | 1.68e-16 | 5 |
muscle tissue disease | 1.68e-16 | 5 |
myopathy | 1.68e-16 | 5 |
muscular disease | 1.68e-16 | 5 |
myotonic dystrophy | 1.68e-16 | 5 |
ovarian cancer | 1.18e-07 | 14 |