FFCP PHASE1:Hg19::chr15:37392616..37392638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4212 | |EntrezGene=4212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7001 | |HGNC=7001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_ENST00000382766,ENST00000444725,uc001zjo.2,uc001zjp.2,uc001zjr.2,uc001zjs.2_5end | |association_with_transcript=65bp_to_ENST00000382766,ENST00000444725,uc001zjo.2,uc001zjp.2,uc001zjr.2,uc001zjs.2_5end | ||
|cluster_id=chr15:37392616..37392638,- | |||
|coexpression_cluster_id=C1403 | |||
|description=CAGE_peak_2_at_MEIS2_5end | |description=CAGE_peak_2_at_MEIS2_5end | ||
|id=chr15:37392616..37392638,- | |id=chr15:37392616..37392638,- | ||
|ontology_enrichment_celltype=CL:0000057!8.63e-08!75;CL:0002620!1.82e-07!23 | |ontology_enrichment_celltype=CL:0000057!8.63e-08!75;CL:0002620!1.82e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.03e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.04e-07,23;CL:0000057,1.07e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.71e-14!365;UBERON:0004111!2.34e-13!241;UBERON:0000025!3.89e-11!194;UBERON:0000481!1.39e-10!347;UBERON:0000477!3.51e-09!286;UBERON:0000468!1.13e-08!659;UBERON:0000062!1.17e-08!511;UBERON:0000483!2.26e-08!309;UBERON:0005743!2.56e-08!86;UBERON:0000073!2.61e-08!94;UBERON:0001016!2.61e-08!94;UBERON:0000480!3.33e-08!626;UBERON:0007023!3.33e-08!115;UBERON:0000467!3.45e-08!625;UBERON:0001017!4.48e-08!82;UBERON:0002346!5.96e-08!90;UBERON:0003075!8.35e-08!86;UBERON:0007284!8.35e-08!86;UBERON:0000119!8.93e-08!312;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0001049!3.07e-07!57;UBERON:0005068!3.07e-07!57;UBERON:0006241!3.07e-07!57;UBERON:0007135!3.07e-07!57;UBERON:0000924!3.77e-07!173;UBERON:0006601!3.77e-07!173;UBERON:0004121!5.78e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.48e-12,240;UBERON:0000025,6.51e-10,192;UBERON:0011216,2.96e-08,223;UBERON:0007023,3.20e-08,114;UBERON:0010314,4.36e-08,132;UBERON:0001017,9.07e-08,81;UBERON:0001016,1.45e-07,89;UBERON:0002346,1.68e-07,86;UBERON:0003075,2.27e-07,82;UBERON:0007284,2.27e-07,82;UBERON:0003064,5.42e-07,28;UBERON:0001049,5.54e-07,56;UBERON:0005068,5.54e-07,56;UBERON:0006241,5.54e-07,56;UBERON:0007135,5.54e-07,56;UBERON:0000955,5.68e-07,68;UBERON:0006238,5.68e-07,68 | |||
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| ||
|short_description=p2@MEIS2 | |short_description=p2@MEIS2 | ||
}} | }} |
Latest revision as of 08:30, 17 September 2015
Short description: | p2@MEIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEIS2_5end |
Coexpression cluster: | C1403_occipital_Fibroblast_parietal_normal_duodenum_temporal_Neurons |
Association with transcript: | 65bp_to_ENST00000382766, ENST00000444725, uc001zjo.2, uc001zjp.2, uc001zjr.2, uc001zjs.2_5end |
EntrezGene: | MEIS2 |
HGNC: | 7001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.04e-07 | 23 |
fibroblast | 1.07e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.48e-12 | 240 |
tube | 6.51e-10 | 192 |
organ system subdivision | 2.96e-08 | 223 |
adult organism | 3.20e-08 | 114 |
structure with developmental contribution from neural crest | 4.36e-08 | 132 |
central nervous system | 9.07e-08 | 81 |
nervous system | 1.45e-07 | 89 |
neurectoderm | 1.68e-07 | 86 |
neural plate | 2.27e-07 | 82 |
presumptive neural plate | 2.27e-07 | 82 |
intermediate mesoderm | 5.42e-07 | 28 |
neural tube | 5.54e-07 | 56 |
neural rod | 5.54e-07 | 56 |
future spinal cord | 5.54e-07 | 56 |
neural keel | 5.54e-07 | 56 |
brain | 5.68e-07 | 68 |
future brain | 5.68e-07 | 68 |