FFCP PHASE1:Hg19::chr10:102989206..102989222,-: Difference between revisions
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|id=chr10:102989206..102989222,-
|short_description=p1@LBX1
|description=CAGE_peak_1_at_LBX1_5end
|association_with_transcript=328bp_to_ENST00000370193_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10660 | |EntrezGene=10660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16960 | |HGNC=16960 | ||
|TSSclassifier=strong | |||
|UniProt=P52954 | |UniProt=P52954 | ||
|association_with_transcript=328bp_to_ENST00000370193_5end | |||
|cluster_id=chr10:102989206..102989222,- | |||
|description=CAGE_peak_1_at_LBX1_5end | |||
|id=chr10:102989206..102989222,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.43e-10;2!CL:0000242;1.43e-10;2!CL:0000214;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.43e-10,2;CL:0000214,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.58e-25;3!UBERON:0006241;8.94e-25;3!UBERON:0003057;8.94e-25;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!6.48e-34!15;UBERON:0003057!6.48e-34!15;UBERON:0004733!5.45e-21!12;UBERON:0002028!5.45e-21!12;UBERON:0007277!5.45e-21!12;UBERON:0004732!2.64e-19!13;UBERON:0002240!6.51e-17!3;UBERON:0001896!1.78e-16!3;UBERON:0005290!1.78e-16!3;UBERON:0010096!1.78e-16!3;UBERON:0002298!2.27e-16!8;UBERON:0001049!1.37e-12!57;UBERON:0005068!1.37e-12!57;UBERON:0006241!1.37e-12!57;UBERON:0007135!1.37e-12!57;UBERON:0002148!1.35e-11!2;UBERON:0009662!1.35e-11!2;UBERON:0000341!4.05e-11!2;UBERON:0005174!2.43e-10!5;UBERON:0001137!2.43e-10!5;UBERON:0002680!8.38e-10!9;UBERON:0001895!8.38e-10!9;UBERON:0010092!8.38e-10!9;UBERON:0001017!3.18e-09!82;UBERON:0005743!1.13e-08!86;UBERON:0007023!4.39e-08!115;UBERON:0000988!5.22e-08!3;UBERON:0006331!5.22e-08!3;UBERON:0000073!1.31e-07!94;UBERON:0001016!1.31e-07!94;UBERON:0003075!1.62e-07!86;UBERON:0007284!1.62e-07!86;UBERON:0002346!4.47e-07!90;UBERON:0002616!7.00e-07!59;UBERON:0000955!9.69e-07!69;UBERON:0006238!9.69e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;8.94e-25;3!UBERON:0005174;8.94e-25;3!UBERON:0001137;8.94e-25;3!UBERON:0002037;4.66e-13;6!UBERON:0002680;5.10e-09;9!UBERON:0001895;5.10e-09;9!UBERON:0006915;2.79e-07;3!UBERON:0007616;2.79e-07;3!UBERON:0002217;2.79e-07;3!UBERON:0002018;2.79e-07;3!UBERON:0004733;5.55e-07;12!UBERON:0002028;5.55e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.29e-24,3;UBERON:0005174,1.29e-24,3;UBERON:0001137,1.29e-24,3;UBERON:0003076,1.85e-19,15;UBERON:0003057,1.85e-19,15;UBERON:0002037,4.81e-13,6;UBERON:0006215,4.81e-13,6;UBERON:0002680,5.20e-09,9;UBERON:0001895,5.20e-09,9;UBERON:0010092,5.20e-09,9;UBERON:0006915,2.32e-07,3;UBERON:0007616,2.32e-07,3;UBERON:0002217,2.32e-07,3;UBERON:0002018,2.32e-07,3;UBERON:0004733,5.64e-07,12;UBERON:0002028,5.64e-07,12;UBERON:0007277,5.64e-07,12 | |||
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|short_description=p1@LBX1 | |||
}} | }} |
Latest revision as of 23:00, 15 September 2015
Short description: | p1@LBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 328bp_to_ENST00000370193_5end |
EntrezGene: | LBX1 |
HGNC: | 16960 |
UniProt: | P52954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.43e-10 | 2 |
synovial cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.29e-24 | 3 |
dorsal region element | 1.29e-24 | 3 |
dorsum | 1.29e-24 | 3 |
posterior neural tube | 1.85e-19 | 15 |
chordal neural plate | 1.85e-19 | 15 |
cerebellum | 4.81e-13 | 6 |
rhombic lip | 4.81e-13 | 6 |
regional part of metencephalon | 5.20e-09 | 9 |
metencephalon | 5.20e-09 | 9 |
future metencephalon | 5.20e-09 | 9 |
stratified squamous epithelium | 2.32e-07 | 3 |
layer of synovial tissue | 2.32e-07 | 3 |
synovial joint | 2.32e-07 | 3 |
synovial membrane of synovial joint | 2.32e-07 | 3 |
segmental subdivision of hindbrain | 5.64e-07 | 12 |
hindbrain | 5.64e-07 | 12 |
presumptive hindbrain | 5.64e-07 | 12 |