FFCP PHASE1:Hg19::chr10:103649352..103649390,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:103649352..103649390,-
|short_description=p5@C10orf76
|description=CAGE_peak_5_at_C10orf76_5end
|association_with_transcript=102bp_to_ENST00000495001_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79591 | |EntrezGene=79591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25788 | |HGNC=25788 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=102bp_to_ENST00000495001_5end | |||
|cluster_id=chr10:103649352..103649390,- | |||
|coexpression_cluster_id=C2032 | |||
|description=CAGE_peak_5_at_C10orf76_5end | |||
|id=chr10:103649352..103649390,- | |||
|ontology_enrichment_celltype=CL:0000945!6.81e-53!24;CL:0000826!6.81e-53!24;CL:0000236!1.91e-35!14;CL:0000838!8.78e-25!52;CL:0000542!3.17e-24!53;CL:0000051!3.17e-24!53;CL:0002087!3.61e-08!119;CL:0002031!1.13e-07!124;CL:0000738!3.37e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.53e-54;13!CL:0000945;5.37e-40;24!CL:0000946;3.12e-21;1!CL:0000786;3.12e-21;1!CL:0000542;4.60e-19;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.25e-68,14;CL:0000945,4.50e-40,24;CL:0000826,4.50e-40,24;CL:0000838,5.02e-24,52;CL:0000542,1.44e-23,53;CL:0000051,1.44e-23,53;CL:0000946,2.30e-21,1;CL:0000786,2.30e-21,1;CL:0000980,2.30e-21,1;CL:0000785,2.23e-11,2;CL:0000955,2.23e-11,2;CL:0000818,2.23e-11,2;CL:0000954,2.23e-11,2;CL:0000816,2.23e-11,2;CL:0002087,1.34e-10,115;CL:0002031,3.81e-10,120;CL:0000738,6.55e-09,136;CL:0000817,5.18e-08,3;CL:0002032,1.83e-07,161;CL:0000837,1.83e-07,161;CL:0000037,3.92e-07,168;CL:0000988,9.54e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.60e-19;53!CL:0000954;2.60e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.09e-20!32;UBERON:0001893!1.07e-18!34;UBERON:0002619!1.50e-18!22;UBERON:0001950!6.67e-17!20;UBERON:0002791!1.27e-16!33;UBERON:0000956!3.75e-16!25;UBERON:0000203!3.75e-16!25;UBERON:0002020!4.56e-16!34;UBERON:0003528!4.56e-16!34;UBERON:0002780!4.58e-15!41;UBERON:0001890!4.58e-15!41;UBERON:0006240!4.58e-15!41;UBERON:0003080!1.21e-14!42;UBERON:0007023!5.03e-14!115;UBERON:0001049!1.79e-13!57;UBERON:0005068!1.79e-13!57;UBERON:0006241!1.79e-13!57;UBERON:0007135!1.79e-13!57;UBERON:0002616!6.62e-13!59;UBERON:0001871!1.91e-12!7;UBERON:0000955!2.32e-10!69;UBERON:0006238!2.32e-10!69;UBERON:0003056!3.06e-09!61;UBERON:0001017!3.13e-08!82;UBERON:0003075!7.83e-08!86;UBERON:0007284!7.83e-08!86;UBERON:0005743!1.05e-07!86;UBERON:0000349!1.21e-07!5;UBERON:0002346!2.42e-07!90;UBERON:0002106!9.77e-07!3;UBERON:0004854!9.77e-07!3;UBERON:0009034!9.77e-07!3;UBERON:0002095!9.77e-07!3;UBERON:0004782!9.77e-07!3;UBERON:0003281!9.77e-07!3;UBERON:0009664!9.77e-07!3;UBERON:0002296!9.77e-07!3;UBERON:0005602!9.77e-07!3;UBERON:0001179!9.77e-07!3;UBERON:0006293!9.77e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;6.98e-21;1!UBERON:0002106;4.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.43e-21,1;UBERON:0002106,4.52e-08,3;UBERON:0004854,4.52e-08,3;UBERON:0009034,4.52e-08,3;UBERON:0002095,4.52e-08,3;UBERON:0004782,4.52e-08,3;UBERON:0003281,4.52e-08,3;UBERON:0009664,4.52e-08,3;UBERON:0002296,4.52e-08,3;UBERON:0005602,4.52e-08,3;UBERON:0001179,4.52e-08,3;UBERON:0006293,4.52e-08,3 | |||
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| ||
|short_description=p5@C10orf76 | |||
}} | }} |
Latest revision as of 23:46, 15 September 2015
Short description: | p5@C10orf76 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C10orf76_5end |
Coexpression cluster: | C2032_splenic_hairy_plasma_CD19_B_xeroderma_tonsil |
Association with transcript: | 102bp_to_ENST00000495001_5end |
EntrezGene: | C10orf76 |
HGNC: | 25788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.25e-68 | 14 |
lymphocyte of B lineage | 4.50e-40 | 24 |
pro-B cell | 4.50e-40 | 24 |
lymphoid lineage restricted progenitor cell | 5.02e-24 | 52 |
lymphocyte | 1.44e-23 | 53 |
common lymphoid progenitor | 1.44e-23 | 53 |
antibody secreting cell | 2.30e-21 | 1 |
plasma cell | 2.30e-21 | 1 |
plasmablast | 2.30e-21 | 1 |
mature B cell | 2.23e-11 | 2 |
pre-B-II cell | 2.23e-11 | 2 |
transitional stage B cell | 2.23e-11 | 2 |
small pre-B-II cell | 2.23e-11 | 2 |
immature B cell | 2.23e-11 | 2 |
nongranular leukocyte | 1.34e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.81e-10 | 120 |
leukocyte | 6.55e-09 | 136 |
precursor B cell | 5.18e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.83e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-07 | 161 |
hematopoietic stem cell | 3.92e-07 | 168 |
hematopoietic cell | 9.54e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 9.43e-21 | 1 |
spleen | 4.52e-08 | 3 |
gastrointestinal system mesentery | 4.52e-08 | 3 |
stomach region | 4.52e-08 | 3 |
mesentery | 4.52e-08 | 3 |
gastrointestinal system serosa | 4.52e-08 | 3 |
mesentery of stomach | 4.52e-08 | 3 |
gut mesentery | 4.52e-08 | 3 |
dorsal mesentery | 4.52e-08 | 3 |
dorsal mesogastrium | 4.52e-08 | 3 |
peritoneal cavity | 4.52e-08 | 3 |
spleen primordium | 4.52e-08 | 3 |