FFCP PHASE1:Hg19::chr11:108093656..108093698,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=472 | |EntrezGene=472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=795 | |HGNC=795 | ||
|TSSclassifier=strong | |||
|UniProt=Q13315 | |UniProt=Q13315 | ||
|association_with_transcript=97bp_to_ENST00000278616,NM_000051,uc001pkb.1,uc009yxr.1_5end | |association_with_transcript=97bp_to_ENST00000278616,NM_000051,uc001pkb.1,uc009yxr.1_5end | ||
|cluster_id=chr11:108093656..108093698,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_ATM_5end | |description=CAGE_peak_3_at_ATM_5end | ||
|id=chr11:108093656..108093698,+ | |id=chr11:108093656..108093698,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.03e-23!53;CL:0000051!1.03e-23!53;CL:0000838!2.93e-23!52;CL:0000037!2.17e-18!172;CL:0000566!2.17e-18!172;CL:0000738!7.94e-18!140;CL:0000988!5.64e-17!182;CL:0002032!5.57e-16!165;CL:0000837!5.57e-16!165;CL:0002087!2.26e-15!119;CL:0000084!3.02e-13!25;CL:0000827!3.02e-13!25;CL:0002031!4.78e-13!124;CL:0000791!1.03e-12!18;CL:0000789!1.03e-12!18;CL:0002420!1.03e-12!18;CL:0002419!1.03e-12!18;CL:0000790!1.03e-12!18;CL:0000945!1.39e-09!24;CL:0000826!1.39e-09!24;CL:0000236!6.86e-09!14;CL:0000625!1.07e-08!11 | |ontology_enrichment_celltype=CL:0000542!1.03e-23!53;CL:0000051!1.03e-23!53;CL:0000838!2.93e-23!52;CL:0000037!2.17e-18!172;CL:0000566!2.17e-18!172;CL:0000738!7.94e-18!140;CL:0000988!5.64e-17!182;CL:0002032!5.57e-16!165;CL:0000837!5.57e-16!165;CL:0002087!2.26e-15!119;CL:0000084!3.02e-13!25;CL:0000827!3.02e-13!25;CL:0002031!4.78e-13!124;CL:0000791!1.03e-12!18;CL:0000789!1.03e-12!18;CL:0002420!1.03e-12!18;CL:0002419!1.03e-12!18;CL:0000790!1.03e-12!18;CL:0000945!1.39e-09!24;CL:0000826!1.39e-09!24;CL:0000236!6.86e-09!14;CL:0000625!1.07e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.17e-18;18!CL:0000789;1.17e-18;18!CL:0002419;1.17e-18;18!CL:0000084;3.45e-17;25!CL:0000542;5.42e-17;53!CL:0000236;1.12e-12;13!CL:0000625;1.82e-12;11!CL:0000945;1.57e-09;24!CL:0000624;3.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.36e-28,53;CL:0000051,9.36e-28,53;CL:0000838,4.41e-27,52;CL:0000738,1.30e-19,136;CL:0000791,1.71e-18,18;CL:0000789,1.71e-18,18;CL:0002420,1.71e-18,18;CL:0002419,1.71e-18,18;CL:0000790,1.71e-18,18;CL:0000037,3.52e-18,168;CL:0000988,4.10e-17,177;CL:0000084,6.73e-17,25;CL:0000827,6.73e-17,25;CL:0002087,2.38e-16,115;CL:0002032,1.56e-15,161;CL:0000837,1.56e-15,161;CL:0002031,2.53e-13,120;CL:0000236,1.09e-12,14;CL:0000625,2.13e-12,11;CL:0000945,2.55e-09,24;CL:0000826,2.55e-09,24;CL:0000624,3.42e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-18;18!CL:0000051;5.42e-17;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.74e-15!115;UBERON:0000178!8.19e-07!15;UBERON:0000179!8.19e-07!15;UBERON:0000463!8.19e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!3.74e-15!115;UBERON:0000178!8.19e-07!15;UBERON:0000179!8.19e-07!15;UBERON:0000463!8.19e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.68e-09;15!UBERON:0000179;1.68e-09;15!UBERON:0000463;1.68e-09;15!UBERON:0002390;8.50e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.13e-14,114;UBERON:0000178,2.16e-09,15;UBERON:0000179,2.16e-09,15;UBERON:0000463,2.16e-09,15 | |||
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| ||
|short_description=p3@ATM | |short_description=p3@ATM | ||
}} | }} |
Latest revision as of 23:11, 24 September 2015
Short description: | p3@ATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATM_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 97bp_to_ENST00000278616, NM_000051, uc001pkb.1, uc009yxr.1_5end |
EntrezGene: | ATM |
HGNC: | 795 |
UniProt: | Q13315 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.36e-28 | 53 |
common lymphoid progenitor | 9.36e-28 | 53 |
lymphoid lineage restricted progenitor cell | 4.41e-27 | 52 |
leukocyte | 1.30e-19 | 136 |
mature alpha-beta T cell | 1.71e-18 | 18 |
alpha-beta T cell | 1.71e-18 | 18 |
immature T cell | 1.71e-18 | 18 |
mature T cell | 1.71e-18 | 18 |
immature alpha-beta T cell | 1.71e-18 | 18 |
hematopoietic stem cell | 3.52e-18 | 168 |
hematopoietic cell | 4.10e-17 | 177 |
T cell | 6.73e-17 | 25 |
pro-T cell | 6.73e-17 | 25 |
nongranular leukocyte | 2.38e-16 | 115 |
hematopoietic oligopotent progenitor cell | 1.56e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 2.53e-13 | 120 |
B cell | 1.09e-12 | 14 |
CD8-positive, alpha-beta T cell | 2.13e-12 | 11 |
lymphocyte of B lineage | 2.55e-09 | 24 |
pro-B cell | 2.55e-09 | 24 |
CD4-positive, alpha-beta T cell | 3.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.13e-14 | 114 |
blood | 2.16e-09 | 15 |
haemolymphatic fluid | 2.16e-09 | 15 |
organism substance | 2.16e-09 | 15 |