FFCP PHASE1:Hg19::chr11:132204977..132204990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:132204977..132204990,+ | |||
|description=CAGE_peak_at_chr11:132204977..132204990,+ | |description=CAGE_peak_at_chr11:132204977..132204990,+ | ||
|id=chr11:132204977..132204990,+ | |id=chr11:132204977..132204990,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.44e-07!180 | |ontology_enrichment_celltype=CL:0000055!6.44e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000317;8.57e-11;2!CL:1000448;8.57e-11;2!CL:0002308;8.57e-11;2!CL:0002140;8.57e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.05e-10,2;CL:1000448,1.05e-10,2;CL:0002308,1.05e-10,2;CL:0002140,1.05e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.40e-16;3!UBERON:0006241;1.80e-07;3!UBERON:0003057;1.80e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!4.12e-08!14 | |ontology_enrichment_disease=DOID:2394!4.12e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.92e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.19e-33!57;UBERON:0005068!7.19e-33!57;UBERON:0006241!7.19e-33!57;UBERON:0007135!7.19e-33!57;UBERON:0002616!2.92e-27!59;UBERON:0001017!3.07e-27!82;UBERON:0005743!5.74e-26!86;UBERON:0000955!1.75e-25!69;UBERON:0006238!1.75e-25!69;UBERON:0002346!9.61e-25!90;UBERON:0000073!1.66e-24!94;UBERON:0001016!1.66e-24!94;UBERON:0003075!1.74e-24!86;UBERON:0007284!1.74e-24!86;UBERON:0000033!3.80e-24!123;UBERON:0002780!3.90e-23!41;UBERON:0001890!3.90e-23!41;UBERON:0006240!3.90e-23!41;UBERON:0000153!6.74e-23!129;UBERON:0007811!6.74e-23!129;UBERON:0002020!8.57e-23!34;UBERON:0003528!8.57e-23!34;UBERON:0001893!1.39e-22!34;UBERON:0000924!1.97e-22!173;UBERON:0006601!1.97e-22!173;UBERON:0003080!2.70e-22!42;UBERON:0004121!5.97e-22!169;UBERON:0002791!8.77e-22!33;UBERON:0001869!6.05e-21!32;UBERON:0000956!3.92e-19!25;UBERON:0000203!3.92e-19!25;UBERON:0003056!4.00e-19!61;UBERON:0001950!5.26e-18!20;UBERON:0002619!8.20e-18!22;UBERON:0000119!8.84e-14!312;UBERON:0000475!2.03e-13!365;UBERON:0000483!2.95e-13!309;UBERON:0003076!8.70e-12!15;UBERON:0003057!8.70e-12!15;UBERON:0000025!9.75e-12!194;UBERON:0000477!7.07e-11!286;UBERON:0004111!7.67e-11!241;UBERON:0007023!2.76e-09!115;UBERON:0004733!6.08e-09!12;UBERON:0002028!6.08e-09!12;UBERON:0007277!6.08e-09!12;UBERON:0004732!5.15e-08!13;UBERON:0000064!8.18e-08!219;UBERON:0000481!9.13e-08!347;UBERON:0000467!1.67e-07!625;UBERON:0000480!2.01e-07!626;UBERON:0000468!2.07e-07!659;UBERON:0000200!2.89e-07!6;UBERON:0000922!3.01e-07!612;UBERON:0000479!4.61e-07!787;UBERON:0000923!4.62e-07!604;UBERON:0005291!4.62e-07!604;UBERON:0006598!4.62e-07!604;UBERON:0002532!4.62e-07!604;UBERON:0001871!4.71e-07!7;UBERON:0002050!5.54e-07!605;UBERON:0005423!5.54e-07!605;UBERON:0002680!5.61e-07!9;UBERON:0001895!5.61e-07!9;UBERON:0010092!5.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;8.57e-11;2!UBERON:0007771;8.57e-11;2!UBERON:0003297;8.57e-11;2!UBERON:0001821;8.57e-11;2!UBERON:0003487;8.57e-11;2!UBERON:0001820;8.57e-11;2!UBERON:0002037;2.54e-08;6!UBERON:0001950;5.64e-08;20!UBERON:0002240;1.80e-07;3!UBERON:0005174;1.80e-07;3!UBERON:0001137;1.80e-07;3!UBERON:0001016;2.02e-07;83!UBERON:0002619;3.15e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.59e-12,56;UBERON:0005068,4.59e-12,56;UBERON:0006241,4.59e-12,56;UBERON:0007135,4.59e-12,56;UBERON:0002419,1.05e-10,2;UBERON:0007771,1.05e-10,2;UBERON:0003297,1.05e-10,2;UBERON:0001821,1.05e-10,2;UBERON:0003487,1.05e-10,2;UBERON:0001820,1.05e-10,2;UBERON:0005089,1.05e-10,2;UBERON:0005088,1.05e-10,2;UBERON:0001017,2.90e-10,81;UBERON:0000955,2.07e-09,68;UBERON:0006238,2.07e-09,68;UBERON:0000073,4.06e-09,53;UBERON:0002616,4.06e-09,53;UBERON:0001016,5.98e-09,89;UBERON:0010371,1.30e-08,104;UBERON:0002037,1.99e-08,6;UBERON:0006215,1.99e-08,6;UBERON:0003076,2.92e-08,15;UBERON:0003057,2.92e-08,15;UBERON:0001950,3.60e-08,20;UBERON:0003075,1.86e-07,82;UBERON:0007284,1.86e-07,82;UBERON:0002619,2.10e-07,22;UBERON:0002240,2.20e-07,3;UBERON:0005174,2.20e-07,3;UBERON:0001137,2.20e-07,3;UBERON:0002346,5.37e-07,86 | |||
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| ||
|short_description=p@chr11:132204977..132204990,+ | |short_description=p@chr11:132204977..132204990,+ | ||
}} | }} |
Latest revision as of 20:05, 23 July 2015
Short description: | p@chr11:132204977..132204990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:132204977..132204990, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.05e-10 | 2 |
epithelial cell of sweat gland | 1.05e-10 | 2 |
epithelial cell of skin gland | 1.05e-10 | 2 |
acinar cell of sebaceous gland | 1.05e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.59e-12 | 56 |
neural rod | 4.59e-12 | 56 |
future spinal cord | 4.59e-12 | 56 |
neural keel | 4.59e-12 | 56 |
skin gland | 1.05e-10 | 2 |
epidermis gland | 1.05e-10 | 2 |
gland of integumental system | 1.05e-10 | 2 |
sebaceous gland | 1.05e-10 | 2 |
skin sebaceous gland | 1.05e-10 | 2 |
sweat gland | 1.05e-10 | 2 |
sweat gland placode | 1.05e-10 | 2 |
sebaceous gland placode | 1.05e-10 | 2 |
central nervous system | 2.90e-10 | 81 |
brain | 2.07e-09 | 68 |
future brain | 2.07e-09 | 68 |
regional part of nervous system | 4.06e-09 | 53 |
regional part of brain | 4.06e-09 | 53 |
nervous system | 5.98e-09 | 89 |
ecto-epithelium | 1.30e-08 | 104 |
cerebellum | 1.99e-08 | 6 |
rhombic lip | 1.99e-08 | 6 |
posterior neural tube | 2.92e-08 | 15 |
chordal neural plate | 2.92e-08 | 15 |
neocortex | 3.60e-08 | 20 |
neural plate | 1.86e-07 | 82 |
presumptive neural plate | 1.86e-07 | 82 |
regional part of cerebral cortex | 2.10e-07 | 22 |
spinal cord | 2.20e-07 | 3 |
dorsal region element | 2.20e-07 | 3 |
dorsum | 2.20e-07 | 3 |
neurectoderm | 5.37e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.92e-09 | 14 |