FFCP PHASE1:Mm9::chr7:81085408..81085418,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=851 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:81085408..81085418,- | |||
|description=CAGE_peak_at_chr7:81085408..81085418,- | |description=CAGE_peak_at_chr7:81085408..81085418,- | ||
|id=chr7:81085408..81085418,- | |id=chr7:81085408..81085418,- | ||
|ontology_enrichment_celltype=CL:0000117!9.73e-09!23;CL:0000337!9.73e-09!23 | |ontology_enrichment_celltype=CL:0000117!9.73e-09!23;CL:0000337!9.73e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.56e-28,23;CL:0000337,4.56e-28,23;CL:0000540,3.71e-19,33;CL:0000047,3.71e-19,33;CL:0000031,3.71e-19,33;CL:0000404,3.71e-19,33;CL:0002613,2.89e-18,3;CL:0000120,1.77e-17,3;CL:0000393,5.37e-16,39;CL:0000211,5.37e-16,39;CL:0002609,6.55e-15,6;CL:0002319,2.24e-14,43;CL:0000221,5.12e-14,44;CL:0000133,5.12e-14,44;CL:0002321,2.93e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.74e-19,5;UBERON:0002435,6.74e-19,5;UBERON:0000204,6.74e-19,5;UBERON:0010082,6.74e-19,5;UBERON:0002020,2.81e-15,34;UBERON:0003528,9.57e-15,29;UBERON:0002791,9.57e-15,29;UBERON:0001893,9.57e-15,29;UBERON:0002420,6.71e-12,8;UBERON:0007245,6.71e-12,8;UBERON:0010009,6.71e-12,8;UBERON:0010011,6.71e-12,8;UBERON:0000454,6.71e-12,8;UBERON:0001017,2.45e-11,73;UBERON:0001016,5.48e-11,75;UBERON:0002780,1.10e-10,39;UBERON:0001890,1.10e-10,39;UBERON:0006240,1.10e-10,39;UBERON:0003080,2.17e-10,40;UBERON:0001049,1.53e-09,52;UBERON:0005068,1.53e-09,52;UBERON:0006241,1.53e-09,52;UBERON:0007135,1.53e-09,52;UBERON:0000073,3.86e-09,54;UBERON:0002616,6.89e-09,46;UBERON:0000955,1.13e-08,47;UBERON:0006238,1.13e-08,47;UBERON:0004121,2.70e-08,95;UBERON:0000924,2.70e-08,95;UBERON:0006601,2.70e-08,95;UBERON:0003056,2.84e-08,49;UBERON:0002346,1.68e-07,64;UBERON:0003075,1.68e-07,64;UBERON:0007284,1.68e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0,1.03689612308478,1.35005938331691,1.47227472945967,0,0,0.979926393719632,2.1086003624012,0,0,0,0.153606533256243,2.63772575460388,3.7509933876988,2.6045668527838,0.279182999001381,0,0.15279824777681,1.17851434189467,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,1.63350657746724,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.204109497453984,0.768682321709099,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.834141747676794,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,2.05809224758569,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0.630540576424764,0.664394068946325,1.11618338060241,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.388076051348264,0,0,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0.483168241652012,0,0,0,0.308132871494482,0,0,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,1.19707462020309,0.512200817262403,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.818462086339379,0.464810523557898,0.385813221962283,1.24905288968973,0,0.644613162144895,0.191288332068843,0,0.463735671240843 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0,1.03689612308478,1.35005938331691,1.47227472945967,0,0,0.979926393719632,2.1086003624012,0,0,0,0.153606533256243,2.63772575460388,3.7509933876988,2.6045668527838,0.279182999001381,0,0.15279824777681,1.17851434189467,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,1.63350657746724,0,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.204109497453984,0.768682321709099,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.834141747676794,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,2.05809224758569,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0.630540576424764,0.664394068946325,1.11618338060241,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.388076051348264,0,0,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0.483168241652012,0,0,0,0.308132871494482,0,0,0.39736270956253,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,1.19707462020309,0.512200817262403,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.543216455383447,0,0.237270036248348,0.394017929502254,0.818462086339379,0.464810523557898,0.385813221962283,1.24905288968973,0,0.644613162144895,0.191288332068843,0,0.463735671240843 | ||
|short_description=p@chr7:81085408..81085418,- | |short_description=p@chr7:81085408..81085418,- | ||
}} | }} |
Latest revision as of 13:55, 5 August 2015
Short description: | p@chr7:81085408..81085418, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:81085408..81085418, - |
Coexpression cluster: | MCL_coexpression_mm9:851 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.56e-28 | 23 |
neuroblast (sensu Vertebrata) | 4.56e-28 | 23 |
neuron | 3.71e-19 | 33 |
neuronal stem cell | 3.71e-19 | 33 |
neuroblast | 3.71e-19 | 33 |
electrically signaling cell | 3.71e-19 | 33 |
striatum neuron | 2.89e-18 | 3 |
granule cell | 1.77e-17 | 3 |
electrically responsive cell | 5.37e-16 | 39 |
electrically active cell | 5.37e-16 | 39 |
neuron of cerebral cortex | 6.55e-15 | 6 |
neural cell | 2.24e-14 | 43 |
ectodermal cell | 5.12e-14 | 44 |
neurectodermal cell | 5.12e-14 | 44 |
embryonic cell | 2.93e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 6.74e-19 | 5 |
striatum | 6.74e-19 | 5 |
ventral part of telencephalon | 6.74e-19 | 5 |
future corpus striatum | 6.74e-19 | 5 |
gray matter | 2.81e-15 | 34 |
brain grey matter | 9.57e-15 | 29 |
regional part of telencephalon | 9.57e-15 | 29 |
telencephalon | 9.57e-15 | 29 |
basal ganglion | 6.71e-12 | 8 |
nuclear complex of neuraxis | 6.71e-12 | 8 |
aggregate regional part of brain | 6.71e-12 | 8 |
collection of basal ganglia | 6.71e-12 | 8 |
cerebral subcortex | 6.71e-12 | 8 |
central nervous system | 2.45e-11 | 73 |
nervous system | 5.48e-11 | 75 |
regional part of forebrain | 1.10e-10 | 39 |
forebrain | 1.10e-10 | 39 |
future forebrain | 1.10e-10 | 39 |
anterior neural tube | 2.17e-10 | 40 |
neural tube | 1.53e-09 | 52 |
neural rod | 1.53e-09 | 52 |
future spinal cord | 1.53e-09 | 52 |
neural keel | 1.53e-09 | 52 |
regional part of nervous system | 3.86e-09 | 54 |
regional part of brain | 6.89e-09 | 46 |
brain | 1.13e-08 | 47 |
future brain | 1.13e-08 | 47 |
ectoderm-derived structure | 2.70e-08 | 95 |
ectoderm | 2.70e-08 | 95 |
presumptive ectoderm | 2.70e-08 | 95 |
pre-chordal neural plate | 2.84e-08 | 49 |
neurectoderm | 1.68e-07 | 64 |
neural plate | 1.68e-07 | 64 |
presumptive neural plate | 1.68e-07 | 64 |