FFCP PHASE1:Hg19::chr11:46404130..46404143,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46404130..46404143,+ | |||
|description=CAGE_peak_at_chr11:46404130..46404143,+ | |description=CAGE_peak_at_chr11:46404130..46404143,+ | ||
|id=chr11:46404130..46404143,+ | |id=chr11:46404130..46404143,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.98e-09!248;CL:0000220!9.22e-09!246;CL:0000133!6.88e-07!59 | |ontology_enrichment_celltype=CL:0002321!1.98e-09!248;CL:0000220!9.22e-09!246;CL:0000133!6.88e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000128;3.56e-10;7!CL:0000126;3.56e-10;7!CL:0000127;3.56e-10;7!CL:1000449;3.40e-07;15!CL:0002605;9.54e-07;3!CL:0002577;9.54e-07;3!CL:0002603;9.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.17e-10,7;CL:0000126,5.17e-10,7;CL:0000127,5.17e-10,7;CL:0002453,5.17e-10,7;CL:1000449,2.30e-07,15;CL:0002577,3.51e-07,3;CL:0002603,9.89e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.40e-07;15!UBERON:0004819;3.40e-07;15!UBERON:0001285;3.40e-07;15!UBERON:0007684;3.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.30e-07,15;UBERON:0009773,2.30e-07,15;UBERON:0001231,2.30e-07,15;UBERON:0001285,2.30e-07,15;UBERON:0007684,2.30e-07,15;UBERON:0004208,2.30e-07,15;UBERON:0006555,6.96e-07,16;UBERON:0004819,6.96e-07,16 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,1.42800483870977,1.25381888591235,0.572471974262113,1.09499540058307,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,1.00267582127178,0,0,0.486634870302636,0.378139268656271,0.886917589850256,1.40535657109002,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0.56530794192401,0,0.550236083880135,0,0,0.35576626268671,0,0,0,0.732186172644509,0,0,0.535798369704479,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,1.14734648299525,0.709336764396714,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.352303495931295,0,0,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0.375355559615893,0,0.877955241761676,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0.484938170456436,0.710019185033229,0,0.169560592310488,0,0,0,0.609868530647977,1.06023814657188,0.813357600086629,0.725627385107593,1.51392510525377,1.45990943630332,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0.811512834825538,0.117408694235822,1.01056513432752,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,1.08524321078289,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0,0,0,0,0,0.613457458595699,1.00034104211935,0,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0,0,1.66435439510497,1.81434175997808,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0.846016147141356,0,0.276242966807689,0.34444334449382,0.364182336013434,0.262248829918848,0.451199612907412,0.0770153371044148,2.35304930753057,0,0.422206515571503,0,0,0.431831832204279,1.54227252690289,0,1.50506932156456,0,0,1.56712328305525,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0.27470839445503,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0.214840489736547,0.290033387828457,0.426133137080504,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.823611089208164,0.235624804691373,0,0,0,0.48763373908959,0.487426979262569,0,0,0.565621727814851,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.593108275997,0,0,0.344743373241465,0,1.38899995946634,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0.588187602953219,0,0,0,0,0,0.141353071433941,0,0,1.06149077404007,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.693373365065693,1.21491816834592,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0.970817393606503,0,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0.213452994739353,1.39866726707491,0.288180834308212,0.114536596165916,0.514784993585894,0,0.124252535565433,0,0,0,0.509991088181609,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.329663433524666,0.202210631562555,0,0,0,0,0.643012593860077,0.412618309791701,3.32352270423348,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,2.17199840701485,0.864221491201268,0.979762080328227,0,0,0,0.906496732161005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0.37494122388632,0,0,0.235265819698172,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0.406870733204662,0,0.214821114084977,0.464033759878494,0,0.800055529326307,0.686791410365586,0,0,0,0.428883182749851,1.30497145982606,0,0,0,0,0.926404341482917,0.657852148736121,0,0.578742114812744,0.168942440653073,0,0,0.911579868532147,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.539124056983409,0.943595651135378,0.218419276384028,0,0.850299680406731,0,0,0,0.315446980005013,0,1.05802783107205,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0.11796972334774,0.366857197043358,0,0.381382095467167,0,0,0.225630985047772,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,2.73947616152849,0,0.9555033757741,0.78624198594322,0,0.116241425368125,0.695433089210318,0,0,0,0,0,0,0,0.846774100381858,0,0,0,1.00669888618013,0.196300467230486,0.243835849964539,0,0,0,0.485710993059139,1.40363678077263,1.59160620129095,0.83244063544298,0,0,0.603851374266694,2.2380505851304,0,0.940634592723046,0.245148321753905,1.17838273550813,0,0,0,0,0,0.193373663920732,0,0,0,0.0802413666891683,1.46067277649303,0,0,0.315543124386369,0.0679914901909147,0,1.5870805215462,0.743990036333503,0,0,0.252332849670158,0.98339014767326,0.760191006068622,0.509944148709909,0,0.0918948995348449,1.0028301571695,0,0,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0.488419611665847,0.320182037633146,0,0.449126010532934,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,1.42800483870977,1.25381888591235,0.572471974262113,1.09499540058307,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,1.00267582127178,0,0,0.486634870302636,0.378139268656271,0.886917589850256,1.40535657109002,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0.56530794192401,0,0.550236083880135,0,0,0.35576626268671,0,0,0,0.732186172644509,0,0,0.535798369704479,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,1.14734648299525,0.709336764396714,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.352303495931295,0,0,0,0,0,0,0.741800787835671,0,0.718618141816238,0,0.375355559615893,0,0.877955241761676,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0.484938170456436,0.710019185033229,0,0.169560592310488,0,0,0,0.609868530647977,1.06023814657188,0.813357600086629,0.725627385107593,1.51392510525377,1.45990943630332,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0.811512834825538,0.117408694235822,1.01056513432752,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,1.08524321078289,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0,0,0,0,0,0.613457458595699,1.00034104211935,0,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0,0,1.66435439510497,1.81434175997808,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0.846016147141356,0,0.276242966807689,0.34444334449382,0.364182336013434,0.262248829918848,0.451199612907412,0.0770153371044148,2.35304930753057,0,0.422206515571503,0,0,0.431831832204279,1.54227252690289,0,1.50506932156456,0,0,1.56712328305525,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0.27470839445503,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0.214840489736547,0.290033387828457,0.426133137080504,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.823611089208164,0.235624804691373,0,0,0,0.48763373908959,0.487426979262569,0,0,0.565621727814851,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.593108275997,0,0,0.344743373241465,0,1.38899995946634,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0.588187602953219,0,0,0,0,0,0.141353071433941,0,0,1.06149077404007,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.693373365065693,1.21491816834592,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0.970817393606503,0,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0.213452994739353,1.39866726707491,0.288180834308212,0.114536596165916,0.514784993585894,0,0.124252535565433,0,0,0,0.509991088181609,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.329663433524666,0.202210631562555,0,0,0,0,0.643012593860077,0.412618309791701,3.32352270423348,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,2.17199840701485,0.864221491201268,0.979762080328227,0,0,0,0.906496732161005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0.37494122388632,0,0,0.235265819698172,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0.406870733204662,0,0.214821114084977,0.464033759878494,0,0.800055529326307,0.686791410365586,0,0,0,0.428883182749851,1.30497145982606,0,0,0,0,0.926404341482917,0.657852148736121,0,0.578742114812744,0.168942440653073,0,0,0.911579868532147,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.539124056983409,0.943595651135378,0.218419276384028,0,0.850299680406731,0,0,0,0.315446980005013,0,1.05802783107205,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0.11796972334774,0.366857197043358,0,0.381382095467167,0,0,0.225630985047772,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,2.73947616152849,0,0.9555033757741,0.78624198594322,0,0.116241425368125,0.695433089210318,0,0,0,0,0,0,0,0.846774100381858,0,0,0,1.00669888618013,0.196300467230486,0.243835849964539,0,0,0,0.485710993059139,1.40363678077263,1.59160620129095,0.83244063544298,0,0,0.603851374266694,2.2380505851304,0,0.940634592723046,0.245148321753905,1.17838273550813,0,0,0,0,0,0.193373663920732,0,0,0,0.0802413666891683,1.46067277649303,0,0,0.315543124386369,0.0679914901909147,0,1.5870805215462,0.743990036333503,0,0,0.252332849670158,0.98339014767326,0.760191006068622,0.509944148709909,0,0.0918948995348449,1.0028301571695,0,0,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0.488419611665847,0.320182037633146,0,0.449126010532934,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr11:46404130..46404143,+ | |short_description=p@chr11:46404130..46404143,+ | ||
}} | }} |
Latest revision as of 22:28, 23 July 2015
Short description: | p@chr11:46404130..46404143, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46404130..46404143, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.17e-10 | 7 |
macroglial cell | 5.17e-10 | 7 |
astrocyte | 5.17e-10 | 7 |
oligodendrocyte precursor cell | 5.17e-10 | 7 |
epithelial cell of nephron | 2.30e-07 | 15 |
placental epithelial cell | 3.51e-07 | 3 |
astrocyte of the cerebellum | 9.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.30e-07 | 15 |
renal tubule | 2.30e-07 | 15 |
nephron tubule | 2.30e-07 | 15 |
nephron | 2.30e-07 | 15 |
uriniferous tubule | 2.30e-07 | 15 |
nephrogenic mesenchyme | 2.30e-07 | 15 |
excretory tube | 6.96e-07 | 16 |
kidney epithelium | 6.96e-07 | 16 |