FFCP PHASE1:Hg19::chr16:2273558..2273637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1877 | |EntrezGene=1877 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3121 | |HGNC=3121 | ||
|TSSclassifier=strong | |||
|UniProt=Q66K89 | |UniProt=Q66K89 | ||
|association_with_transcript=0bp_to_ENST00000301727,NM_004424,uc002cpm.2,uc010bsi.2,uc010bsj.2_5end | |association_with_transcript=0bp_to_ENST00000301727,NM_004424,uc002cpm.2,uc010bsi.2,uc010bsj.2_5end | ||
|cluster_id=chr16:2273558..2273637,+ | |||
|description=CAGE_peak_1_at_E4F1_5end | |description=CAGE_peak_1_at_E4F1_5end | ||
|id=chr16:2273558..2273637,+ | |id=chr16:2273558..2273637,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.56e-07!18;CL:0000789!4.56e-07!18;CL:0002420!4.56e-07!18;CL:0002419!4.56e-07!18;CL:0000790!4.56e-07!18 | |ontology_enrichment_celltype=CL:0000791!4.56e-07!18;CL:0000789!4.56e-07!18;CL:0002420!4.56e-07!18;CL:0002419!4.56e-07!18;CL:0000790!4.56e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.32e-07;18!CL:0000789;6.32e-07;18!CL:0002419;6.32e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.56e-07,18;CL:0000789,4.56e-07,18;CL:0002420,4.56e-07,18;CL:0002419,4.56e-07,18;CL:0000790,4.56e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;6.32e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.33e-08!57;UBERON:0005068!2.33e-08!57;UBERON:0006241!2.33e-08!57;UBERON:0007135!2.33e-08!57;UBERON:0007023!1.46e-07!115;UBERON:0002616!6.50e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.48e-08,53;UBERON:0002616,4.48e-08,53;UBERON:0001049,6.55e-08,56;UBERON:0005068,6.55e-08,56;UBERON:0006241,6.55e-08,56;UBERON:0007135,6.55e-08,56;UBERON:0007023,2.53e-07,114 | |||
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9218729 | ||
|short_description=p1@E4F1 | |short_description=p1@E4F1 | ||
}} | }} |
Latest revision as of 05:39, 25 September 2015
Short description: | p1@E4F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_E4F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301727, NM_004424, uc002cpm.2, uc010bsi.2, uc010bsj.2_5end |
EntrezGene: | E4F1 |
HGNC: | 3121 |
UniProt: | Q66K89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.56e-07 | 18 |
alpha-beta T cell | 4.56e-07 | 18 |
immature T cell | 4.56e-07 | 18 |
mature T cell | 4.56e-07 | 18 |
immature alpha-beta T cell | 4.56e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.48e-08 | 53 |
regional part of brain | 4.48e-08 | 53 |
neural tube | 6.55e-08 | 56 |
neural rod | 6.55e-08 | 56 |
future spinal cord | 6.55e-08 | 56 |
neural keel | 6.55e-08 | 56 |
adult organism | 2.53e-07 | 114 |