FFCP PHASE1:Hg19::chr10:18580030..18580043,-: Difference between revisions
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|id=chr10:18580030..18580043,-
|short_description=p@chr10:18580030..18580043,-
|description=CAGE_peak_at_chr10:18580030..18580043,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:18580030..18580043,- | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_at_chr10:18580030..18580043,- | |||
|id=chr10:18580030..18580043,- | |||
|ontology_enrichment_celltype=CL:0000242!1.62e-17!2;CL:0000167!1.32e-09!1;CL:0000164!1.32e-09!1;CL:0000502!1.32e-09!1;CL:0000172!1.32e-09!1;CL:0000173!1.32e-09!1;CL:0002351!1.32e-09!1;CL:0000312!1.55e-07!5;CL:0000095!5.97e-07!17;CL:0000123!5.97e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.66e-21;2!CL:0000123;5.70e-21;2!CL:0000242;5.70e-21;2!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.66e-21,2;CL:0000242,5.70e-21,2;CL:0000312,3.22e-09,5;CL:0000240,6.78e-08,6;CL:0000311,6.78e-08,6;CL:0000079,6.78e-08,6;CL:0000237,6.78e-08,6;CL:0000036,6.78e-08,6;CL:0000357,6.78e-08,6;CL:0000114,6.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:2355!1.12e-09!1;DOID:4430!1.32e-09!1;DOID:4362!1.55e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:2355;3.30e-40;1!DOID:74;6.96e-21;2!DOID:1287;3.79e-11;4!DOID:4362;2.97e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.30e-40,1;DOID:74,6.96e-21,2;DOID:1287,3.79e-11,4;DOID:4362,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003296!3.35e-19!4;UBERON:0010133!3.35e-19!4;UBERON:0001894!8.75e-19!7;UBERON:0006222!8.75e-19!7;UBERON:0000369!4.22e-18!4;UBERON:0002435!4.22e-18!4;UBERON:0000204!4.22e-18!4;UBERON:0010082!4.22e-18!4;UBERON:0000007!7.07e-18!2;UBERON:0002780!2.83e-17!41;UBERON:0001890!2.83e-17!41;UBERON:0006240!2.83e-17!41;UBERON:0003080!7.75e-17!42;UBERON:0003056!2.83e-16!61;UBERON:0005743!4.50e-15!86;UBERON:0000349!9.08e-15!5;UBERON:0001049!1.07e-14!57;UBERON:0005068!1.07e-14!57;UBERON:0006241!1.07e-14!57;UBERON:0007135!1.07e-14!57;UBERON:0002420!2.79e-14!9;UBERON:0007245!2.79e-14!9;UBERON:0010009!2.79e-14!9;UBERON:0010011!2.79e-14!9;UBERON:0000454!2.79e-14!9;UBERON:0000955!6.02e-14!69;UBERON:0006238!6.02e-14!69;UBERON:0001017!1.32e-13!82;UBERON:0000073!1.91e-13!94;UBERON:0001016!1.91e-13!94;UBERON:0003075!4.62e-13!86;UBERON:0007284!4.62e-13!86;UBERON:0002346!2.18e-12!90;UBERON:0004121!9.14e-12!169;UBERON:0002616!1.27e-11!59;UBERON:0000033!1.56e-11!123;UBERON:0005383!1.87e-11!3;UBERON:0005382!1.87e-11!3;UBERON:0000924!2.00e-11!173;UBERON:0006601!2.00e-11!173;UBERON:0007023!5.21e-11!115;UBERON:0000153!6.99e-11!129;UBERON:0007811!6.99e-11!129;UBERON:0009663!1.36e-10!7;UBERON:0001736!1.84e-09!1;UBERON:0006298!1.84e-09!1;UBERON:0001874!3.53e-09!1;UBERON:0001882!5.72e-09!1;UBERON:0005403!5.72e-09!1;UBERON:0002308!2.38e-08!9;UBERON:0000125!2.38e-08!9;UBERON:0001869!4.32e-08!32;UBERON:0002791!7.72e-08!33;UBERON:0002020!1.33e-07!34;UBERON:0003528!1.33e-07!34;UBERON:0001893!1.33e-07!34;UBERON:0000966!3.45e-07!5;UBERON:0005388!3.45e-07!5;UBERON:0001802!3.45e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0006955;4.66e-21;2!UBERON:0004801;4.66e-21;2!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0006955,4.66e-21,2;UBERON:0004801,4.66e-21,2;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6 | |||
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|short_description=p@chr10:18580030..18580043,- | |||
}} | }} |
Latest revision as of 12:23, 23 July 2015
Short description: | p@chr10:18580030..18580043, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18580030..18580043, - |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.66e-21 | 2 |
Merkel cell | 5.70e-21 | 2 |
keratinocyte | 3.22e-09 | 5 |
stratified squamous epithelial cell | 6.78e-08 | 6 |
keratin accumulating cell | 6.78e-08 | 6 |
stratified epithelial cell | 6.78e-08 | 6 |
keratinizing barrier epithelial cell | 6.78e-08 | 6 |
epithelial fate stem cell | 6.78e-08 | 6 |
stratified epithelial stem cell | 6.78e-08 | 6 |
surface ectodermal cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
uterine epithelium | 4.66e-21 | 2 |
cervix epithelium | 4.66e-21 | 2 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.30e-40 | 1 |
hematopoietic system disease | 6.96e-21 | 2 |
cardiovascular system disease | 3.79e-11 | 4 |
cervical cancer | 2.97e-09 | 5 |