FFCP PHASE1:Hg19::chr11:64004888..64004909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7423 | |EntrezGene=7423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12681 | |HGNC=12681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-98bp_to_ENST00000541681_5end | |association_with_transcript=-98bp_to_ENST00000541681_5end | ||
|cluster_id=chr11:64004888..64004909,+ | |||
|coexpression_cluster_id=C3183 | |||
|description=CAGE_peak_3_at_VEGFB_5end | |description=CAGE_peak_3_at_VEGFB_5end | ||
|id=chr11:64004888..64004909,+ | |id=chr11:64004888..64004909,+ | ||
|ontology_enrichment_celltype=CL:0000325!2.04e-08!39 | |ontology_enrichment_celltype=CL:0000325!2.04e-08!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.24e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.73e-13,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;4.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,3.99e-07,7 | |||
|phase1_expression=2.18014055124668,4.06790995392868,1.83240725324762,2.00146596706261,3.5756887554183,0,5.06599756336621,4.42203911398782,3.91778442299758,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0.229240217243854,0.328402357799783,0.0787107813136792,0,0,0,1.83884244895785,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0,1.56740831967947,1.29557466407592,2.83333124397605,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.260118695119756,0.493313713811028,0,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.289648807765598,0,0.670700859703636,0.511450247374121,0,1.00267582127178,1.44846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,0,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0.371457501329565,0,0,0,0,0.838998872419812,0.275118041940067,0.626984899610432,0.258416759169329,0,1.00416183829401,1.20848795132744,0,1.22031028774085,0,3.24056779152704,0.535798369704479,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,1.01304409331664,0.132409180813219,1.43418310374407,0.709336764396714,0,0,2.4666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0.454072282934794,0,0,0.624320153660641,0.570471821544449,0.298897361103602,0.117434498643765,0,0.421352420106746,0,0.122834317311768,0.413303124703062,3.56400857184616,1.97813543422845,0,0,0.336672227908132,0.125118519871964,0,1.31693286264251,0.919463387397059,4.20666564938471,0.226864366320042,0.179389635688862,0.427114777637135,0.635795703478686,0,0.515262646192195,0,0.744467425326359,0,0,0.252433774244115,0.184099797284599,0.646584227275248,0,0.403008392910561,0.169560592310488,0.773043412653187,0.545492241181669,0.286804595389004,0.121973706129595,0.530119073285941,0.464775771478074,0.414644220061482,0.252320850875628,0.36497735907583,3.12899064659632,0.643240938192885,2.76269842704961,0,0,0.591534000199219,0.168584690078102,0.241011029883482,0.772057809126758,0,0.237270619111097,0.404493924480493,0.392442930250692,0.38474715694639,2.21446636387394,1.40241773803446,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0.245976877086227,0.171567810298526,1.09750285408626,0,0.301586917234893,0.277765335475589,0,0,0,0.463721619900307,0.117408694235822,0.433099343283221,0.925971025153221,1.33177906564219,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,1.49682337822484,1.03664057770386,0.720599767084807,1.13618190083742,0.888970520090367,4.58386110669933,11.7217447210047,3.4214489204541,1.54241239054985,1.50171528921959,2.00078502841405,0,0.43596006883328,0.07333828582095,0.775630294546667,7.15312891703765,0,2.39344304926383,2.08014873822732,0,0,0.532844358032199,0.714889968290738,0,0,0,0,0,0.301439377059586,0,0.799783929456456,0,2.00902836572851,4.21667878966063,0.718874566474748,1.14861935834114,0,0.289562613335158,0.205476322550383,0.358121926479791,0.448340575974109,0.394061520403854,0.431255149719035,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,1.00034104211935,1.62759014219841,0.207970861530807,0.713715955188647,1.10391690523754,0.702848489956279,4.8151375956435,34.1111256083977,21.729344971426,0,0.737476674166813,1.39013783148933,3.52442083432933,2.74514739048685,0,0,0.106727557803444,0.606255142892519,0,0.907170879989041,1.24053903909388,0,0.841980283299221,1.79394808957981,0.511707249066704,0.804269605718038,1.48418066444991,0.462629081407967,1.59805552781814,1.64254312027618,0.519254429183621,1.04589340613963,1.0877350463246,0.802025881213139,0.552485933615378,0.114814448164607,0.364182336013434,2.49136388422906,0.451199612907412,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,2.00675909541941,0,0,0.671624264166535,0,0,0.769350375349168,0.656029291399411,1.30151357865721,1.33953315142039,0.183138929636687,0,0.574265537996172,0.650060246036521,0,2.70678011217942,0.154048617114644,0.15350367472613,0,0.322260734604821,0.290033387828457,0.0852266274161009,0.623224249527161,0.661139661443912,0.192190067365106,0,0,2.32422774648643,0,0,0.616067160352178,1.06461206063404,0.869932992075073,1.11194531462352,0.143124886741991,0.744316738719335,0.316379424718726,0.190630193923825,0.767693373934002,1.28381696410176,1.27281299170375,0.78494864019923,0.359744915166629,0.274537029736055,0.471249609382746,0.404364963146632,0,0.421258456238981,0.48763373908959,0.731140468893853,2.11300293513511,0.545999645631943,0.989838023675989,0,2.2054613741845,1.32687795048244,2.63070531152258,0.578775534266688,0.655894752046633,1.01455188481352,0.30982349809975,0.845086807596724,0,0,1.07001315444375,0,1.68886108238131,4.2808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| ||
|short_description=p3@VEGFB | |short_description=p3@VEGFB | ||
}} | }} |
Latest revision as of 01:49, 19 September 2015
Short description: | p3@VEGFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VEGFB_5end |
Coexpression cluster: | C3183_Osteoblast_breast_Mesenchymal_Melanocyte_Fibroblast_left_Adipocyte |
Association with transcript: | -98bp_to_ENST00000541681_5end |
EntrezGene: | VEGFB |
HGNC: | 12681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.73e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 3.99e-07 | 7 |