FFCP PHASE1:Hg19::chr10:29115553..29115564,-: Difference between revisions
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|id=chr10:29115553..29115564,-
|short_description=p@chr10:29115553..29115564,-
|description=CAGE_peak_at_chr10:29115553..29115564,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:29115553..29115564,- | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_at_chr10:29115553..29115564,- | |||
|id=chr10:29115553..29115564,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;3.27e-23;3!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,3.27e-23,3;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;2.41e-14;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,2.41e-14,20 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.20e-25!20;UBERON:0000200!1.97e-23!6;UBERON:0002619!2.07e-23!22;UBERON:0001869!5.81e-22!32;UBERON:0002771!2.17e-21!3;UBERON:0000956!1.07e-20!25;UBERON:0000203!1.07e-20!25;UBERON:0001893!1.09e-20!34;UBERON:0001871!8.84e-18!7;UBERON:0002780!3.50e-17!41;UBERON:0001890!3.50e-17!41;UBERON:0006240!3.50e-17!41;UBERON:0003080!8.97e-17!42;UBERON:0003112!1.21e-16!1;UBERON:0000032!1.21e-16!1;UBERON:0005253!1.21e-16!1;UBERON:0003128!1.21e-16!1;UBERON:0002241!1.21e-16!1;UBERON:0001703!1.21e-16!1;UBERON:0004761!1.21e-16!1;UBERON:0009617!1.21e-16!1;UBERON:0002902!1.65e-16!1;UBERON:0009899!1.65e-16!1;UBERON:0007190!2.25e-16!1;UBERON:0002022!3.07e-16!1;UBERON:0002791!8.53e-16!33;UBERON:0002020!2.44e-15!34;UBERON:0003528!2.44e-15!34;UBERON:0001049!2.49e-12!57;UBERON:0005068!2.49e-12!57;UBERON:0006241!2.49e-12!57;UBERON:0007135!2.49e-12!57;UBERON:0002616!6.62e-12!59;UBERON:0003056!1.66e-11!61;UBERON:0000955!5.45e-10!69;UBERON:0006238!5.45e-10!69;UBERON:0001017!2.28e-08!82;UBERON:0003075!4.61e-08!86;UBERON:0007284!4.61e-08!86;UBERON:0005743!5.77e-08!86;UBERON:0007023!8.91e-08!115;UBERON:0002346!1.10e-07!90;UBERON:0000073!3.53e-07!94;UBERON:0001016!3.53e-07!94;UBERON:0000033!4.27e-07!123;UBERON:0000153!9.75e-07!129;UBERON:0007811!9.75e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.27e-23;3!UBERON:0007616;3.27e-23;3!UBERON:0002217;3.27e-23;3!UBERON:0002018;3.27e-23;3!UBERON:0000945;1.83e-14;5!UBERON:0010039;1.83e-14;5!UBERON:0004905;1.35e-09;8!UBERON:0000982;1.35e-09;8!UBERON:0004770;1.35e-09;8!UBERON:0004457;1.12e-08;9!UBERON:0000042;1.12e-08;9!UBERON:0000486;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.27e-23,3;UBERON:0007616,3.27e-23,3;UBERON:0002217,3.27e-23,3;UBERON:0002018,3.27e-23,3;UBERON:0004905,1.35e-09,8;UBERON:0000982,1.35e-09,8;UBERON:0004770,1.35e-09,8;UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8;UBERON:0004457,7.92e-07,12;UBERON:0000042,7.92e-07,12 | |||
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|short_description=p@chr10:29115553..29115564,- | |||
}} | }} |
Latest revision as of 13:01, 23 July 2015
Short description: | p@chr10:29115553..29115564, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:29115553..29115564, - |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 3.27e-23 | 3 |
GAG secreting cell | 1.12e-08 | 9 |
carbohydrate secreting cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.27e-23 | 3 |
layer of synovial tissue | 3.27e-23 | 3 |
synovial joint | 3.27e-23 | 3 |
synovial membrane of synovial joint | 3.27e-23 | 3 |
articulation | 1.35e-09 | 8 |
skeletal joint | 1.35e-09 | 8 |
articular system | 1.35e-09 | 8 |
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
cavity lining | 7.92e-07 | 12 |
serous membrane | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 2.41e-14 | 20 |