FFCP PHASE1:Hg19::chr11:65625678..65625687,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1072 | |EntrezGene=1072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1874 | |HGNC=1874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000530945_5end | |association_with_transcript=-13bp_to_ENST00000530945_5end | ||
|cluster_id=chr11:65625678..65625687,- | |||
|coexpression_cluster_id=C3189 | |||
|description=CAGE_peak_2_at_CFL1_5end | |description=CAGE_peak_2_at_CFL1_5end | ||
|id=chr11:65625678..65625687,- | |id=chr11:65625678..65625687,- | ||
|ontology_enrichment_celltype=CL:0000548!4.72e-26!679;CL:0000004!4.72e-26!679;CL:0000255!4.72e-26!679;CL:0000012!2.53e-25!682;CL:0002371!1.21e-24!591;CL:0000144!5.60e-24!625;CL:0000055!1.04e-22!180;CL:0000222!3.80e-21!119;CL:0000220!1.91e-19!246;CL:0002321!4.85e-19!248;CL:0000183!6.60e-19!59;CL:0000680!7.99e-17!57;CL:0000056!7.99e-17!57;CL:0000355!7.99e-17!57;CL:0000393!1.69e-16!60;CL:0000211!1.69e-16!60;CL:0000187!2.77e-16!54;CL:0000192!1.64e-13!42;CL:0000514!1.64e-13!42;CL:0000003!1.24e-12!722;CL:0000359!4.32e-10!32;CL:1000449!7.29e-09!16;CL:0002681!2.37e-07!13;CL:0002584!2.37e-07!13;CL:0002078!3.54e-07!44;CL:1000507!3.75e-07!12;CL:1000494!3.75e-07!12;CL:1000497!3.75e-07!18;CL:0002518!3.75e-07!18;CL:0000115!4.66e-07!35 | |ontology_enrichment_celltype=CL:0000548!4.72e-26!679;CL:0000004!4.72e-26!679;CL:0000255!4.72e-26!679;CL:0000012!2.53e-25!682;CL:0002371!1.21e-24!591;CL:0000144!5.60e-24!625;CL:0000055!1.04e-22!180;CL:0000222!3.80e-21!119;CL:0000220!1.91e-19!246;CL:0002321!4.85e-19!248;CL:0000183!6.60e-19!59;CL:0000680!7.99e-17!57;CL:0000056!7.99e-17!57;CL:0000355!7.99e-17!57;CL:0000393!1.69e-16!60;CL:0000211!1.69e-16!60;CL:0000187!2.77e-16!54;CL:0000192!1.64e-13!42;CL:0000514!1.64e-13!42;CL:0000003!1.24e-12!722;CL:0000359!4.32e-10!32;CL:1000449!7.29e-09!16;CL:0002681!2.37e-07!13;CL:0002584!2.37e-07!13;CL:0002078!3.54e-07!44;CL:1000507!3.75e-07!12;CL:1000494!3.75e-07!12;CL:1000497!3.75e-07!18;CL:0002518!3.75e-07!18;CL:0000115!4.66e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000192;9.20e-10;43!CL:0000359;1.49e-09;32!CL:0000187;1.58e-09;55!CL:1000449;4.57e-09;15!CL:0000393;1.33e-08;61!CL:0000211;1.33e-08;61!CL:0002681;1.54e-07;12!CL:0002584;1.54e-07;12!CL:1000497;3.08e-07;17!CL:0002518;3.08e-07;17!CL:1000507;3.61e-07;10!CL:1000494;3.61e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.81e-21,121;CL:0002321,2.20e-19,250;CL:0000680,8.72e-17,58;CL:0000056,8.72e-17,58;CL:0000355,8.72e-17,58;CL:0000393,1.80e-16,61;CL:0000211,1.80e-16,61;CL:0000187,3.05e-16,55;CL:0000192,1.85e-13,43;CL:0000514,1.85e-13,43;CL:0000359,4.32e-10,32;CL:1000449,4.69e-09,15;CL:0002681,1.54e-07,12;CL:0002584,1.54e-07,12;CL:0002078,2.01e-07,45;CL:0000115,2.60e-07,36;CL:1000497,3.06e-07,17;CL:0002518,3.06e-07,17;CL:1000507,3.76e-07,10;CL:1000494,3.76e-07,10;CL:0000057,8.56e-07,76;CL:0000723,9.77e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;9.20e-10;43!CL:0000355;2.49e-09;58!CL:0000222;9.32e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.06e-20!83;UBERON:0002329!6.06e-20!83;UBERON:0003077!6.06e-20!83;UBERON:0003059!6.06e-20!83;UBERON:0007282!6.06e-20!83;UBERON:0009618!6.06e-20!83;UBERON:0007285!6.06e-20!83;UBERON:0004290!1.04e-17!70;UBERON:0000486!2.19e-17!82;UBERON:0005256!1.04e-15!143;UBERON:0001134!2.61e-14!61;UBERON:0002036!2.61e-14!61;UBERON:0003082!2.61e-14!61;UBERON:0002049!1.87e-13!79;UBERON:0007798!1.87e-13!79;UBERON:0002385!8.18e-13!63;UBERON:0001015!8.18e-13!63;UBERON:0000383!8.18e-13!63;UBERON:0000119!4.32e-12!312;UBERON:0000483!1.76e-11!309;UBERON:0000490!1.88e-10!138;UBERON:0000055!4.31e-10!69;UBERON:0003914!1.17e-09!118;UBERON:0001981!1.60e-09!60;UBERON:0007500!1.60e-09!60;UBERON:0004537!1.60e-09!60;UBERON:0006965!1.60e-09!60;UBERON:0004872!2.13e-09!84;UBERON:0002100!3.39e-09!216;UBERON:0001637!6.39e-09!42;UBERON:0003509!6.39e-09!42;UBERON:0004572!6.39e-09!42;UBERON:0004211!7.29e-09!16;UBERON:0001285!7.29e-09!16;UBERON:0007684!7.29e-09!16;UBERON:0003220!7.29e-09!16;UBERON:0004208!7.29e-09!16;UBERON:0006555!4.84e-08!17;UBERON:0005103!4.84e-08!17;UBERON:0000083!4.84e-08!17;UBERON:0009201!4.84e-08!17;UBERON:0004819!4.84e-08!17;UBERON:0006553!4.84e-08!17;UBERON:0003074!4.84e-08!17;UBERON:0003060!4.84e-08!17;UBERON:0000481!9.87e-08!347;UBERON:0000353!1.17e-07!17;UBERON:0000475!1.32e-07!365;UBERON:0004535!1.78e-07!110;UBERON:0001225!2.37e-07!13;UBERON:0008987!2.37e-07!13;UBERON:0009773!3.75e-07!12;UBERON:0001231!3.75e-07!12;UBERON:0004810!3.75e-07!12;UBERON:0003104!5.86e-07!238;UBERON:0009142!5.86e-07!238;UBERON:0000080!5.96e-07!18;UBERON:0002120!5.96e-07!18;UBERON:0004875!5.96e-07!18;UBERON:0005721!5.96e-07!18;UBERON:0005754!5.96e-07!18;UBERON:0007297!5.96e-07!18 | |ontology_enrichment_uberon=UBERON:0000914!6.06e-20!83;UBERON:0002329!6.06e-20!83;UBERON:0003077!6.06e-20!83;UBERON:0003059!6.06e-20!83;UBERON:0007282!6.06e-20!83;UBERON:0009618!6.06e-20!83;UBERON:0007285!6.06e-20!83;UBERON:0004290!1.04e-17!70;UBERON:0000486!2.19e-17!82;UBERON:0005256!1.04e-15!143;UBERON:0001134!2.61e-14!61;UBERON:0002036!2.61e-14!61;UBERON:0003082!2.61e-14!61;UBERON:0002049!1.87e-13!79;UBERON:0007798!1.87e-13!79;UBERON:0002385!8.18e-13!63;UBERON:0001015!8.18e-13!63;UBERON:0000383!8.18e-13!63;UBERON:0000119!4.32e-12!312;UBERON:0000483!1.76e-11!309;UBERON:0000490!1.88e-10!138;UBERON:0000055!4.31e-10!69;UBERON:0003914!1.17e-09!118;UBERON:0001981!1.60e-09!60;UBERON:0007500!1.60e-09!60;UBERON:0004537!1.60e-09!60;UBERON:0006965!1.60e-09!60;UBERON:0004872!2.13e-09!84;UBERON:0002100!3.39e-09!216;UBERON:0001637!6.39e-09!42;UBERON:0003509!6.39e-09!42;UBERON:0004572!6.39e-09!42;UBERON:0004211!7.29e-09!16;UBERON:0001285!7.29e-09!16;UBERON:0007684!7.29e-09!16;UBERON:0003220!7.29e-09!16;UBERON:0004208!7.29e-09!16;UBERON:0006555!4.84e-08!17;UBERON:0005103!4.84e-08!17;UBERON:0000083!4.84e-08!17;UBERON:0009201!4.84e-08!17;UBERON:0004819!4.84e-08!17;UBERON:0006553!4.84e-08!17;UBERON:0003074!4.84e-08!17;UBERON:0003060!4.84e-08!17;UBERON:0000481!9.87e-08!347;UBERON:0000353!1.17e-07!17;UBERON:0000475!1.32e-07!365;UBERON:0004535!1.78e-07!110;UBERON:0001225!2.37e-07!13;UBERON:0008987!2.37e-07!13;UBERON:0009773!3.75e-07!12;UBERON:0001231!3.75e-07!12;UBERON:0004810!3.75e-07!12;UBERON:0003104!5.86e-07!238;UBERON:0009142!5.86e-07!238;UBERON:0000080!5.96e-07!18;UBERON:0002120!5.96e-07!18;UBERON:0004875!5.96e-07!18;UBERON:0005721!5.96e-07!18;UBERON:0005754!5.96e-07!18;UBERON:0007297!5.96e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.57e-09;15!UBERON:0004819;4.57e-09;15!UBERON:0001285;4.57e-09;15!UBERON:0007684;4.57e-09;15!UBERON:0003914;5.94e-09;74!UBERON:0000353;1.07e-07;15!UBERON:0001225;1.54e-07;12!UBERON:0008987;1.54e-07;12!UBERON:0004211;3.61e-07;10!UBERON:0009773;3.61e-07;10!UBERON:0001231;3.61e-07;10!UBERON:0004810;3.61e-07;10!UBERON:0007500;4.10e-07;56!UBERON:0001981;4.10e-07;56!UBERON:0004537;4.10e-07;56!UBERON:0002049;4.64e-07;75!UBERON:0007798;4.64e-07;75 | |||
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| ||
|short_description=p2@CFL1 | |short_description=p2@CFL1 | ||
}} | }} |
Latest revision as of 11:25, 19 September 2015
Short description: | p2@CFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CFL1_5end |
Coexpression cluster: | C3189_Renal_Alveolar_Astrocyte_Hepatic_Smooth_Mesenchymal_Preadipocyte |
Association with transcript: | -13bp_to_ENST00000530945_5end |
EntrezGene: | CFL1 |
HGNC: | 1874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.81e-21 | 121 |
embryonic cell | 2.20e-19 | 250 |
muscle precursor cell | 8.72e-17 | 58 |
myoblast | 8.72e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.72e-17 | 58 |
electrically responsive cell | 1.80e-16 | 61 |
electrically active cell | 1.80e-16 | 61 |
muscle cell | 3.05e-16 | 55 |
smooth muscle cell | 1.85e-13 | 43 |
smooth muscle myoblast | 1.85e-13 | 43 |
vascular associated smooth muscle cell | 4.32e-10 | 32 |
epithelial cell of nephron | 4.69e-09 | 15 |
kidney cortical cell | 1.54e-07 | 12 |
renal cortical epithelial cell | 1.54e-07 | 12 |
meso-epithelial cell | 2.01e-07 | 45 |
endothelial cell | 2.60e-07 | 36 |
kidney cell | 3.06e-07 | 17 |
kidney epithelial cell | 3.06e-07 | 17 |
kidney tubule cell | 3.76e-07 | 10 |
nephron tubule epithelial cell | 3.76e-07 | 10 |
fibroblast | 8.56e-07 | 76 |
somatic stem cell | 9.77e-07 | 433 |