FFCP PHASE1:Hg19::chr16:57653438..57653455,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9289 | |EntrezGene=9289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4512 | |HGNC=4512 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-194bp_to_uc002elz.1,uc002ema.1_5end | |association_with_transcript=-194bp_to_uc002elz.1,uc002ema.1_5end | ||
|cluster_id=chr16:57653438..57653455,+ | |||
|description=CAGE_peak_18_at_GPR56_5end | |description=CAGE_peak_18_at_GPR56_5end | ||
|id=chr16:57653438..57653455,+ | |id=chr16:57653438..57653455,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.86e-14!43;CL:0000223!1.19e-11!59;CL:0002251!3.65e-11!21;CL:0000066!7.71e-11!254;CL:0002621!1.14e-08!3 | |ontology_enrichment_celltype=CL:0002076!4.86e-14!43;CL:0000223!1.19e-11!59;CL:0002251!3.65e-11!21;CL:0000066!7.71e-11!254;CL:0002621!1.14e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.21e-40;1 | |||
|ontology_enrichment_disease=DOID:1749!6.59e-12!14;DOID:305!1.43e-11!106;DOID:0050687!4.01e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;5.69e-21;2!DOID:1749;2.37e-12;14!DOID:3908;3.22e-09;5!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.70e-21,2;DOID:1749,2.24e-12,14;DOID:3908,3.22e-09,5;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000166!8.52e-14!21;UBERON:0000344!4.42e-13!12;UBERON:0000161!7.11e-12!35;UBERON:0000165!1.47e-11!28;UBERON:0000930!1.47e-11!28;UBERON:0001004!2.03e-11!72;UBERON:0004119!6.30e-11!169;UBERON:0000925!6.30e-11!169;UBERON:0006595!6.30e-11!169;UBERON:0001007!4.67e-10!155;UBERON:0001555!4.67e-10!155;UBERON:0007026!4.67e-10!155;UBERON:0003729!2.68e-09!5;UBERON:0001949!1.14e-08!3;UBERON:0003343!3.37e-07!4;UBERON:0004785!3.37e-07!4;UBERON:0001829!3.76e-07!2;UBERON:0000466!5.51e-07!126;UBERON:0000058!9.27e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.21e-40;1!UBERON:0001567;2.21e-40;1!UBERON:0004903;5.69e-21;2!UBERON:0001829;5.69e-21;2!UBERON:0004089;5.69e-21;2!UBERON:0002173;5.69e-21;2!UBERON:0002186;5.69e-21;2!UBERON:0004821;1.83e-14;3!UBERON:0007499;1.83e-14;3!UBERON:0003215;1.83e-14;3!UBERON:0010368;1.83e-14;3!UBERON:0009911;1.83e-14;3!UBERON:0002299;1.83e-14;3!UBERON:0006524;1.83e-14;3!UBERON:0008874;1.83e-14;3!UBERON:0002169;1.83e-14;3!UBERON:0004894;1.83e-14;3!UBERON:0003343;3.42e-11;4!UBERON:0004785;3.42e-11;4!UBERON:0009856;3.42e-11;4!UBERON:0000161;2.46e-09;19!UBERON:0000166;2.46e-09;19!UBERON:0001044;6.78e-08;6!UBERON:0000974;6.78e-08;6!UBERON:0003293;6.78e-08;6!UBERON:0003294;6.78e-08;6!UBERON:0010047;6.78e-08;6!UBERON:0003408;6.78e-08;6!UBERON:0000167;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.30e-40,1;UBERON:0001567,3.30e-40,1;UBERON:0008801,3.30e-40,1;UBERON:0004903,5.70e-21,2;UBERON:0002173,5.70e-21,2;UBERON:0002186,5.70e-21,2;UBERON:0001829,6.96e-21,2;UBERON:0004089,6.96e-21,2;UBERON:0004821,1.83e-14,3;UBERON:0003215,1.83e-14,3;UBERON:0010368,1.83e-14,3;UBERON:0009911,1.83e-14,3;UBERON:0002299,1.83e-14,3;UBERON:0006524,1.83e-14,3;UBERON:0008874,1.83e-14,3;UBERON:0002169,1.83e-14,3;UBERON:0004894,1.83e-14,3;UBERON:0003343,3.10e-11,4;UBERON:0004785,3.10e-11,4;UBERON:0000166,3.39e-08,22;UBERON:0001044,7.25e-08,6;UBERON:0003293,7.25e-08,6;UBERON:0003294,7.25e-08,6;UBERON:0010047,7.25e-08,6;UBERON:0000167,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.27126825146383,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.278847488557207,0,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0.587954384486266,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,3.70386824306231,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.235939446695481,1.65085738669511,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0.638812138197976,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0.22589216407792,0,0.452888530700021,0,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0,0.892769693028288,0,0.320965466756673,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0.134704106029175,0.573777643141411,0,0.244209805832924,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.27126825146383,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0.278847488557207,0,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0.587954384486266,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,3.70386824306231,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.235939446695481,1.65085738669511,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0.638812138197976,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0.22589216407792,0,0.452888530700021,0,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0,0.892769693028288,0,0.320965466756673,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0.134704106029175,0.573777643141411,0,0.244209805832924,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p18@GPR56 | |short_description=p18@GPR56 | ||
}} | }} |
Latest revision as of 04:10, 17 September 2015
Short description: | p18@GPR56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GPR56_5end |
Coexpression cluster: | NA |
Association with transcript: | -194bp_to_uc002elz.1, uc002ema.1_5end |
EntrezGene: | GPR56 |
HGNC: | 4512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.30e-40 | 1 |
cheek | 3.30e-40 | 1 |
parotid gland primordium | 3.30e-40 | 1 |
bronchoalveolar duct junction | 5.70e-21 | 2 |
alveolar duct | 5.70e-21 | 2 |
bronchiole | 5.70e-21 | 2 |
major salivary gland | 6.96e-21 | 2 |
midface | 6.96e-21 | 2 |
pulmonary alveolus epithelium | 1.83e-14 | 3 |
alveolus | 1.83e-14 | 3 |
pulmonary lobule | 1.83e-14 | 3 |
lobule | 1.83e-14 | 3 |
alveolus of lung | 1.83e-14 | 3 |
alveolar system | 1.83e-14 | 3 |
pulmonary acinus | 1.83e-14 | 3 |
alveolar sac | 1.83e-14 | 3 |
alveolar wall | 1.83e-14 | 3 |
mucosa of oral region | 3.10e-11 | 4 |
respiratory system mucosa | 3.10e-11 | 4 |
oral opening | 3.39e-08 | 22 |
saliva-secreting gland | 7.25e-08 | 6 |
gland of oral region | 7.25e-08 | 6 |
gland of foregut | 7.25e-08 | 6 |
oral gland | 7.25e-08 | 6 |
oral cavity | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.70e-21 | 2 |
squamous cell carcinoma | 2.24e-12 | 14 |
non-small cell lung carcinoma | 3.22e-09 | 5 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |