FFCP PHASE1:Hg19::chr10:33623460..33623478,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:33623460..33623478,-
|short_description=p3@NRP1
|description=CAGE_peak_3_at_NRP1_5end
|association_with_transcript=-10bp_to_ENST00000374816,ENST0000037482...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8829 | |EntrezGene=8829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8004 | |HGNC=8004 | ||
|UniProt=E7EX60, | |TSSclassifier=strong | ||
|UniProt=E7EX60,Q5T7F1 | |||
|association_with_transcript=-10bp_to_ENST00000374816,ENST00000374821_5end | |||
|cluster_id=chr10:33623460..33623478,- | |||
|description=CAGE_peak_3_at_NRP1_5end | |||
|id=chr10:33623460..33623478,- | |||
|ontology_enrichment_celltype=CL:0000222!1.23e-15!119;CL:0000115!4.34e-14!35;CL:0000055!6.17e-12!180;CL:0002139!3.20e-11!24;CL:0002078!9.88e-11!44;CL:0000057!2.25e-10!75;CL:0000680!3.07e-10!57;CL:0000056!3.07e-10!57;CL:0000355!3.07e-10!57;CL:0000187!3.33e-09!54;CL:0000183!5.74e-09!59;CL:0000071!1.88e-08!18;CL:0002546!1.88e-08!18;CL:0000359!2.36e-08!32;CL:0000192!6.85e-08!42;CL:0000514!6.85e-08!42;CL:0000393!1.63e-07!60;CL:0000211!1.63e-07!60;CL:0000213!2.22e-07!57;CL:0000215!2.22e-07!57;CL:0002620!4.61e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.60e-13;36!CL:0002139;2.06e-11;24!CL:0000071;1.37e-08;18!CL:0000359;4.78e-08;32!CL:0002078;6.39e-08;45!CL:0000473;7.77e-08;39!CL:0000234;7.77e-08;39!CL:0002620;3.28e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.67e-16,121;CL:0000115,1.15e-14,36;CL:0002139,2.00e-11,24;CL:0002078,3.59e-11,45;CL:0000680,1.37e-10,58;CL:0000056,1.37e-10,58;CL:0000355,1.37e-10,58;CL:0000057,1.57e-10,76;CL:0000187,1.57e-09,55;CL:0000071,1.34e-08,18;CL:0002546,1.34e-08,18;CL:0000359,1.70e-08,32;CL:0000192,3.47e-08,43;CL:0000514,3.47e-08,43;CL:0000393,9.07e-08,61;CL:0000211,9.07e-08,61;CL:0000213,2.58e-07,58;CL:0000215,2.58e-07,58;CL:0002620,3.52e-07,23;CL:0002194,5.71e-07,59;CL:0000576,5.71e-07,59;CL:0000040,5.71e-07,59;CL:0000559,5.71e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002546;1.37e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.09e-30!659;UBERON:0000467!5.99e-27!625;UBERON:0000480!1.64e-26!626;UBERON:0004872!2.97e-22!84;UBERON:0000055!1.40e-21!69;UBERON:0002049!2.20e-20!79;UBERON:0007798!2.20e-20!79;UBERON:0001981!5.61e-20!60;UBERON:0007500!5.61e-20!60;UBERON:0004537!5.61e-20!60;UBERON:0006965!5.61e-20!60;UBERON:0003914!1.46e-19!118;UBERON:0000926!3.90e-19!448;UBERON:0004120!3.90e-19!448;UBERON:0006603!3.90e-19!448;UBERON:0001009!3.90e-17!113;UBERON:0002050!8.42e-17!605;UBERON:0005423!8.42e-17!605;UBERON:0003081!1.24e-16!216;UBERON:0000923!1.76e-16!604;UBERON:0005291!1.76e-16!604;UBERON:0006598!1.76e-16!604;UBERON:0002532!1.76e-16!604;UBERON:0000922!1.91e-16!612;UBERON:0004535!4.18e-16!110;UBERON:0004111!2.73e-15!241;UBERON:0002204!4.72e-15!167;UBERON:0001637!5.95e-15!42;UBERON:0003509!5.95e-15!42;UBERON:0004572!5.95e-15!42;UBERON:0000477!4.50e-14!286;UBERON:0004573!1.95e-13!33;UBERON:0004571!1.95e-13!33;UBERON:0004290!3.10e-13!70;UBERON:0000914!4.75e-13!83;UBERON:0002329!4.75e-13!83;UBERON:0003077!4.75e-13!83;UBERON:0003059!4.75e-13!83;UBERON:0007282!4.75e-13!83;UBERON:0009618!4.75e-13!83;UBERON:0007285!4.75e-13!83;UBERON:0000025!1.08e-12!194;UBERON:0005256!4.80e-12!143;UBERON:0002385!5.13e-12!63;UBERON:0001015!5.13e-12!63;UBERON:0000383!5.13e-12!63;UBERON:0000490!6.89e-12!138;UBERON:0001134!9.45e-12!61;UBERON:0002036!9.45e-12!61;UBERON:0003082!9.45e-12!61;UBERON:0000119!3.15e-11!312;UBERON:0000483!3.51e-11!309;UBERON:0000486!2.15e-10!82;UBERON:0000062!2.37e-10!511;UBERON:0000479!2.75e-10!787;UBERON:0002100!4.09e-10!216;UBERON:0000475!7.74e-10!365;UBERON:0000947!1.83e-09!21;UBERON:0010191!1.83e-09!21;UBERON:0007100!5.83e-09!27;UBERON:0001986!1.88e-08!18;UBERON:0004638!1.88e-08!18;UBERON:0004852!1.88e-08!18;UBERON:0003103!5.14e-08!69;UBERON:0000948!7.06e-08!24;UBERON:0005498!7.06e-08!24;UBERON:0004140!7.06e-08!24;UBERON:0009881!7.06e-08!24;UBERON:0004141!7.06e-08!24;UBERON:0003084!7.06e-08!24;UBERON:0007005!7.06e-08!24;UBERON:0004139!7.06e-08!24;UBERON:0004291!7.06e-08!24;UBERON:0000481!1.76e-07!347;UBERON:0006914!4.97e-07!25;UBERON:0000487!5.30e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.63e-13;33!UBERON:0004571;8.63e-13;33!UBERON:0001637;8.04e-12;42!UBERON:0003509;8.04e-12;42!UBERON:0004572;8.04e-12;42!UBERON:0000055;3.18e-11;65!UBERON:0007500;1.21e-10;56!UBERON:0001981;1.21e-10;56!UBERON:0004537;1.21e-10;56!UBERON:0000947;1.28e-09;21!UBERON:0010191;1.28e-09;21!UBERON:0007100;5.44e-09;25!UBERON:0004638;1.37e-08;18!UBERON:0001986;1.37e-08;18!UBERON:0004852;1.37e-08;18!UBERON:0002049;1.71e-08;75!UBERON:0007798;1.71e-08;75!UBERON:0000948;7.07e-08;22!UBERON:0002385;7.55e-08;31!UBERON:0001015;7.55e-08;31!UBERON:0000383;7.55e-08;31!UBERON:0003914;1.72e-07;74!UBERON:0006914;4.10e-07;25!UBERON:0000487;4.44e-07;22 | |||
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| ||
|short_description=p3@NRP1 | |||
}} | }} |
Latest revision as of 00:58, 18 September 2015
Short description: | p3@NRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000374816, ENST00000374821_5end |
EntrezGene: | NRP1 |
HGNC: | 8004 |
UniProt: | E7EX60Q5T7F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.67e-16 | 121 |
endothelial cell | 1.15e-14 | 36 |
endothelial cell of vascular tree | 2.00e-11 | 24 |
meso-epithelial cell | 3.59e-11 | 45 |
muscle precursor cell | 1.37e-10 | 58 |
myoblast | 1.37e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.37e-10 | 58 |
fibroblast | 1.57e-10 | 76 |
muscle cell | 1.57e-09 | 55 |
blood vessel endothelial cell | 1.34e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.34e-08 | 18 |
vascular associated smooth muscle cell | 1.70e-08 | 32 |
smooth muscle cell | 3.47e-08 | 43 |
smooth muscle myoblast | 3.47e-08 | 43 |
electrically responsive cell | 9.07e-08 | 61 |
electrically active cell | 9.07e-08 | 61 |
lining cell | 2.58e-07 | 58 |
barrier cell | 2.58e-07 | 58 |
skin fibroblast | 3.52e-07 | 23 |
monopoietic cell | 5.71e-07 | 59 |
monocyte | 5.71e-07 | 59 |
monoblast | 5.71e-07 | 59 |
promonocyte | 5.71e-07 | 59 |