Personal tools

FFCP PHASE1:Mm9::chr9:100543944..100543961,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20842
|EntrezGene=20842
|HGNC=
|HGNC=
|MCL_coexpression_id=70
|TSSclassifier=NA
|UniProt=Q8C918
|UniProt=Q8C918
|association_with_transcript=-32bp_to_ENSMUST00000041595_5end
|association_with_transcript=-32bp_to_ENSMUST00000041595_5end
|cluster_id=chr9:100543944..100543961,+
|description=CAGE_peak_5_at_Stag1_5end
|description=CAGE_peak_5_at_Stag1_5end
|id=chr9:100543944..100543961,+
|id=chr9:100543944..100543961,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000991!2.29e-09!18;UBERON:0005564!2.29e-09!18;UBERON:0004176!5.40e-09!17;UBERON:0009196!5.40e-09!17;UBERON:0009117!5.40e-09!17;UBERON:0000473!8.88e-08!14;UBERON:0003133!2.99e-07!24;UBERON:0003135!4.67e-07!15
|ontology_enrichment_uberon=UBERON:0000991!2.29e-09!18;UBERON:0005564!2.29e-09!18;UBERON:0004176!5.40e-09!17;UBERON:0009196!5.40e-09!17;UBERON:0009117!5.40e-09!17;UBERON:0000473!8.88e-08!14;UBERON:0003133!2.99e-07!24;UBERON:0003135!4.67e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.19e-15,14;UBERON:0004176,2.21e-14,17;UBERON:0009196,2.21e-14,17;UBERON:0009117,2.21e-14,17;UBERON:0003135,5.20e-14,15;UBERON:0000991,2.12e-13,18;UBERON:0005564,2.12e-13,18;UBERON:0003101,5.96e-13,16;UBERON:0000079,5.96e-13,16;UBERON:0003133,6.45e-11,24;UBERON:0005156,8.23e-10,26;UBERON:0000990,8.23e-10,26;UBERON:0002323,1.75e-09,37;UBERON:0004458,1.75e-09,37;UBERON:0003886,4.02e-09,38;UBERON:0002553,8.85e-09,39
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,0.513602189793617,0.437102012094987,0.333109761815663,1.01237633694913,2.79824751251259,0.157731082679119,0,0.84877930359606,2.04103896362567,0.198581902401771,0,0.799962113967033,0.22940928106717,0,0,0,0.380046838912748,0,0.443461021310609,0,1.23012957516914,0,0,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0.683045484958446,1.45653105909346,0.125896817975577,0.405507724878058,0.367093504323363,0.782391344348039,0,0,0.777719596297134,0,0,0.335565212115473,0,0.672187598284928,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0,1.0165335962074,0,0,0,0,0,0.384218305321555,0.622137673850866,0,0,0,0.220868540951614,0.61245399607477,0,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0,0,0.279182999001381,0,0.61119299110724,0,0.427115042397309,0,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0,0,0.60289056221049,2.11659672844269,0.251333182659351,1.23597483867187,0.433798070759735,0.884610551949874,1.13236794963186,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.449371918214468,0,0.251308704225729,0.695297280769106,0.767146371990992,0.62336413367868,0.486723789203273,0.916554274652847,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,0.459804208866946,0.360124259610698,0.753524089178575,0.680364991513279,0.896796041993948,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0.879755620819744,0,0.556094498451196,0.696504333044333,1.23469281844766,0.995171334092466,0.702213187313235,0.257347907114715,0.852490498186778,0.414251545071004,0.234526059981096,0.540186184383045,0.946978942340841,0.590292695242212,0.617068451549513,1.39520366850245,0,0.350296027101508,0.987359099480883,0.164167464079095,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,0.210289948564127,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,1.03093969057675,1.00841762311671,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,0.771494018793504,0.379419222745544,0.738050739898011,0.31399745568275,0.246794327843601,0,0.667380422864376,0.589676985339609,1.12431056192427,0.202860121388503,1.20588579876208,0.50925170356284,1.15078454980324,0.972811360650212,1.64736847912849,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,0.369506380333209,0.947457058852424,1.14075483509418,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0.94652465824877,0.390438744296638,0,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.99358059645788,0.890328018336276,1.46598263418218,0.329940245945071,0,0.485561272309963,0.906970670894253,0.188605079755898,1.18120757152309,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,1.02131881726136,0,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,0.704015124191131,1.27099242518292,0.220528398054962,0,0.645857706783622,0.542816324353403,0.477489376012546,0.984845398470368,0.291480836629851,0.18542530201051,1.19609616558497,0.619160603889667,0.740778109478847,1.69531611304222,2.59719032669948,0.228778173206523,1.01987057996313,0,0.276399947608848,0,0.158167996790568,0.813277868507395,0.216010681643603,0.627264888043406,0.655087691238533,0.809186078308924,0.578574190077352,0.26175594198403,0.259229946583586,0,12.4012446510522,1.34564891439581,1.82004339502807,2.33341426012857,1.42075805825504,1.68956125490778,1.87771581833206,6.77062801188541,10.4859344425711,12.5623742829523,9.21696020025169,0.948033361884535,0.202725215290164,0.308132871494482,0.909445760844565,1.43221356533985,0.39736270956253,0.360586348559907,1.03382669022204,1.00966449948148,1.06689529317,0.806609481094724,0.194915761479505,0.577271049841977,0.233753804363138,0.226730383615211,0.665957860122194,1.16628013592318,1.34307693091263,0.386379188064381,0.375364950902364,0.183151624267265,0,0,0,0,0.572895513439397,0,0,2.2661816921691,0.675022500231806,0,0.906284817968409,0.51776031175182,0.415149390336707,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.735374033800057,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.565879024158229,0.468207537349412,0.512201219238954,0.746661096422973,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.883193520806384,1.02860775715625,0.70990322463735,1.1921809497366,0,0.470546902076653,0.930760686808441,0.365855945745545,0.789209134313529,0.543216455383447,0.561142271657738,0.593175090620871,1.18205378850676,0.409231043169689,0.619747364743864,0.385813221962283,0,1.16965804222704,0.644613162144895,0.382576664137687,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,0.513602189793617,0.437102012094987,0.333109761815663,1.01237633694913,2.79824751251259,0.157731082679119,0,0.84877930359606,2.04103896362567,0.198581902401771,0,0.799962113967033,0.22940928106717,0,0,0,0.380046838912748,0,0.443461021310609,0,1.23012957516914,0,0,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0.683045484958446,1.45653105909346,0.125896817975577,0.405507724878058,0.367093504323363,0.782391344348039,0,0,0.777719596297134,0,0,0.335565212115473,0,0.672187598284928,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0,1.0165335962074,0,0,0,0,0,0.384218305321555,0.622137673850866,0,0,0,0.220868540951614,0.61245399607477,0,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0,0,0.279182999001381,0,0.61119299110724,0,0.427115042397309,0,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0,0,0.60289056221049,2.11659672844269,0.251333182659351,1.23597483867187,0.433798070759735,0.884610551949874,1.13236794963186,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.449371918214468,0,0.251308704225729,0.695297280769106,0.767146371990992,0.62336413367868,0.486723789203273,0.916554274652847,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,0.459804208866946,0.360124259610698,0.753524089178575,0.680364991513279,0.896796041993948,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0.879755620819744,0,0.556094498451196,0.696504333044333,1.23469281844766,0.995171334092466,0.702213187313235,0.257347907114715,0.852490498186778,0.414251545071004,0.234526059981096,0.540186184383045,0.946978942340841,0.590292695242212,0.617068451549513,1.39520366850245,0,0.350296027101508,0.987359099480883,0.164167464079095,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,0.210289948564127,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,1.03093969057675,1.00841762311671,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,0.771494018793504,0.379419222745544,0.738050739898011,0.31399745568275,0.246794327843601,0,0.667380422864376,0.589676985339609,1.12431056192427,0.202860121388503,1.20588579876208,0.50925170356284,1.15078454980324,0.972811360650212,1.64736847912849,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,0.369506380333209,0.947457058852424,1.14075483509418,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0.94652465824877,0.390438744296638,0,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.99358059645788,0.890328018336276,1.46598263418218,0.329940245945071,0,0.485561272309963,0.906970670894253,0.188605079755898,1.18120757152309,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,1.02131881726136,0,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,0.704015124191131,1.27099242518292,0.220528398054962,0,0.645857706783622,0.542816324353403,0.477489376012546,0.984845398470368,0.291480836629851,0.18542530201051,1.19609616558497,0.619160603889667,0.740778109478847,1.69531611304222,2.59719032669948,0.228778173206523,1.01987057996313,0,0.276399947608848,0,0.158167996790568,0.813277868507395,0.216010681643603,0.627264888043406,0.655087691238533,0.809186078308924,0.578574190077352,0.26175594198403,0.259229946583586,0,12.4012446510522,1.34564891439581,1.82004339502807,2.33341426012857,1.42075805825504,1.68956125490778,1.87771581833206,6.77062801188541,10.4859344425711,12.5623742829523,9.21696020025169,0.948033361884535,0.202725215290164,0.308132871494482,0.909445760844565,1.43221356533985,0.39736270956253,0.360586348559907,1.03382669022204,1.00966449948148,1.06689529317,0.806609481094724,0.194915761479505,0.577271049841977,0.233753804363138,0.226730383615211,0.665957860122194,1.16628013592318,1.34307693091263,0.386379188064381,0.375364950902364,0.183151624267265,0,0,0,0,0.572895513439397,0,0,2.2661816921691,0.675022500231806,0,0.906284817968409,0.51776031175182,0.415149390336707,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.735374033800057,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.565879024158229,0.468207537349412,0.512201219238954,0.746661096422973,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.883193520806384,1.02860775715625,0.70990322463735,1.1921809497366,0,0.470546902076653,0.930760686808441,0.365855945745545,0.789209134313529,0.543216455383447,0.561142271657738,0.593175090620871,1.18205378850676,0.409231043169689,0.619747364743864,0.385813221962283,0,1.16965804222704,0.644613162144895,0.382576664137687,0.220591419119515,0.463735671240843
|short_description=p5@Stag1
|short_description=p5@Stag1
}}
}}

Latest revision as of 01:22, 26 September 2015

Short description:p5@Stag1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Stag1_5end
Coexpression cluster:MCL_coexpression_mm9:70
Association with transcript: -32bp_to_ENSMUST00000041595_5end
EntrezGene:Stag1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Stag1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D910.49
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
testis3.19e-1514
external genitalia2.21e-1417
indifferent external genitalia2.21e-1417
indifferent gonad2.21e-1417
male reproductive organ5.20e-1415
gonad2.12e-1318
gonad primordium2.12e-1318
male organism5.96e-1316
male reproductive system5.96e-1316
reproductive organ6.45e-1124
reproductive structure8.23e-1026
reproductive system8.23e-1026
body cavity1.75e-0937
body cavity or lining1.75e-0937
body cavity precursor4.02e-0938
anatomical cavity8.85e-0939
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:100543944..100543961,%2B&oldid=4225263"