FFCP PHASE1:Hg19::chr11:69453962..69453973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:69453962..69453973,+ | |||
|description=CAGE_peak_at_chr11:69453962..69453973,+ | |description=CAGE_peak_at_chr11:69453962..69453973,+ | ||
|id=chr11:69453962..69453973,+ | |id=chr11:69453962..69453973,+ | ||
|ontology_enrichment_celltype=CL:0002321!9.63e-17!248;CL:0000055!3.80e-16!180;CL:0000220!5.00e-16!246;CL:0000066!5.15e-11!254;CL:0000548!5.34e-11!679;CL:0000004!5.34e-11!679;CL:0000255!5.34e-11!679;CL:0000012!1.18e-10!682;CL:0002139!1.50e-09!24;CL:0000222!1.67e-09!119;CL:0000057!6.18e-09!75;CL:0000144!1.15e-08!625;CL:0000115!1.20e-08!35;CL:0000071!1.59e-08!18;CL:0002546!1.59e-08!18;CL:0002078!4.06e-08!44;CL:0000003!7.46e-07!722;CL:0002371!7.70e-07!591 | |ontology_enrichment_celltype=CL:0002321!9.63e-17!248;CL:0000055!3.80e-16!180;CL:0000220!5.00e-16!246;CL:0000066!5.15e-11!254;CL:0000548!5.34e-11!679;CL:0000004!5.34e-11!679;CL:0000255!5.34e-11!679;CL:0000012!1.18e-10!682;CL:0002139!1.50e-09!24;CL:0000222!1.67e-09!119;CL:0000057!6.18e-09!75;CL:0000144!1.15e-08!625;CL:0000115!1.20e-08!35;CL:0000071!1.59e-08!18;CL:0002546!1.59e-08!18;CL:0002078!4.06e-08!44;CL:0000003!7.46e-07!722;CL:0002371!7.70e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.01e-18;3!CL:0000115;3.45e-10;36!CL:0000148;8.68e-10;10!CL:0002543;1.18e-09;6!CL:0002551;2.02e-09;6!CL:0002592;7.99e-09;3!CL:0000071;2.99e-08;18!CL:0000147;5.16e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.29e-19,3;CL:0000115,5.40e-12,36;CL:0000148,8.63e-10,10;CL:0000541,8.63e-10,10;CL:0002543,1.15e-09,6;CL:0002078,2.67e-09,45;CL:0002551,2.92e-09,6;CL:0002592,1.02e-08,3;CL:0000213,1.38e-08,58;CL:0000215,1.38e-08,58;CL:0000071,3.45e-08,18;CL:0002546,3.45e-08,18;CL:0000147,5.14e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002546;2.99e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.44e-13!118;UBERON:0002049!3.33e-13!79;UBERON:0007798!3.33e-13!79;UBERON:0000055!5.01e-13!69;UBERON:0004872!2.25e-12!84;UBERON:0001981!6.46e-12!60;UBERON:0007500!6.46e-12!60;UBERON:0004537!6.46e-12!60;UBERON:0006965!6.46e-12!60;UBERON:0004535!2.53e-10!110;UBERON:0001637!9.30e-10!42;UBERON:0003509!9.30e-10!42;UBERON:0004572!9.30e-10!42;UBERON:0001009!1.33e-09!113;UBERON:0000487!3.18e-09!22;UBERON:0000119!4.82e-09!312;UBERON:0000483!1.07e-08!309;UBERON:0001986!1.59e-08!18;UBERON:0004638!1.59e-08!18;UBERON:0004852!1.59e-08!18;UBERON:0000468!1.96e-08!659;UBERON:0000490!1.15e-07!138;UBERON:0004573!1.91e-07!33;UBERON:0004571!1.91e-07!33;UBERON:0006914!2.04e-07!25;UBERON:0004111!2.18e-07!241 | |ontology_enrichment_uberon=UBERON:0003914!2.44e-13!118;UBERON:0002049!3.33e-13!79;UBERON:0007798!3.33e-13!79;UBERON:0000055!5.01e-13!69;UBERON:0004872!2.25e-12!84;UBERON:0001981!6.46e-12!60;UBERON:0007500!6.46e-12!60;UBERON:0004537!6.46e-12!60;UBERON:0006965!6.46e-12!60;UBERON:0004535!2.53e-10!110;UBERON:0001637!9.30e-10!42;UBERON:0003509!9.30e-10!42;UBERON:0004572!9.30e-10!42;UBERON:0001009!1.33e-09!113;UBERON:0000487!3.18e-09!22;UBERON:0000119!4.82e-09!312;UBERON:0000483!1.07e-08!309;UBERON:0001986!1.59e-08!18;UBERON:0004638!1.59e-08!18;UBERON:0004852!1.59e-08!18;UBERON:0000468!1.96e-08!659;UBERON:0000490!1.15e-07!138;UBERON:0004573!1.91e-07!33;UBERON:0004571!1.91e-07!33;UBERON:0006914!2.04e-07!25;UBERON:0004111!2.18e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;7.99e-09;3!UBERON:0005985;7.99e-09;3!UBERON:0001621;7.99e-09;3!UBERON:0004638;2.99e-08;18!UBERON:0001986;2.99e-08;18!UBERON:0004852;2.99e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.02e-08,3;UBERON:0002049,1.11e-08,78;UBERON:0007798,1.11e-08,78;UBERON:0000055,1.32e-08,68;UBERON:0007500,2.34e-08,59;UBERON:0001981,2.34e-08,59;UBERON:0004537,2.34e-08,59;UBERON:0006965,2.34e-08,59;UBERON:0004638,3.45e-08,18;UBERON:0001986,3.45e-08,18;UBERON:0004852,3.45e-08,18 | |||
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| ||
|short_description=p@chr11:69453962..69453973,+ | |short_description=p@chr11:69453962..69453973,+ | ||
}} | }} |
Latest revision as of 01:57, 24 July 2015
Short description: | p@chr11:69453962..69453973, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69453962..69453973, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.29e-19 | 3 |
endothelial cell | 5.40e-12 | 36 |
melanocyte | 8.63e-10 | 10 |
melanoblast | 8.63e-10 | 10 |
vein endothelial cell | 1.15e-09 | 6 |
meso-epithelial cell | 2.67e-09 | 45 |
fibroblast of dermis | 2.92e-09 | 6 |
smooth muscle cell of the coronary artery | 1.02e-08 | 3 |
lining cell | 1.38e-08 | 58 |
barrier cell | 1.38e-08 | 58 |
blood vessel endothelial cell | 3.45e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.45e-08 | 18 |
pigment cell | 5.14e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.02e-08 | 3 |
vasculature | 1.11e-08 | 78 |
vascular system | 1.11e-08 | 78 |
vessel | 1.32e-08 | 68 |
epithelial tube open at both ends | 2.34e-08 | 59 |
blood vessel | 2.34e-08 | 59 |
blood vasculature | 2.34e-08 | 59 |
vascular cord | 2.34e-08 | 59 |
blood vessel endothelium | 3.45e-08 | 18 |
endothelium | 3.45e-08 | 18 |
cardiovascular system endothelium | 3.45e-08 | 18 |