FFCP PHASE1:Hg19::chr10:44101850..44101896,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:44101850..44101896,+
|short_description=p1@ZNF485
|description=CAGE_peak_1_at_ZNF485_5end
|association_with_transcript=0bp_to_ENST00000361807,ENST00000374...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220992 | |EntrezGene=220992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23440 | |HGNC=23440 | ||
|UniProt=Q8NCK3, | |TSSclassifier=strong | ||
|UniProt=Q8NCK3,B4DSE6,C9JV60 | |||
|association_with_transcript=0bp_to_ENST00000361807,ENST00000374435,ENST00000374437,ENST00000430885,ENST00000480678,NM_145312,uc010qfc.1,uc010qfd.1_5end | |||
|cluster_id=chr10:44101850..44101896,+ | |||
|description=CAGE_peak_1_at_ZNF485_5end | |||
|id=chr10:44101850..44101896,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.32e-08!24;CL:0000826!5.32e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.93e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.02e-08,24;CL:0000826,5.02e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.34e-07,51;DOID:0060083,6.34e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.19e-11!94;UBERON:0001016!1.19e-11!94;UBERON:0001049!3.64e-10!57;UBERON:0005068!3.64e-10!57;UBERON:0006241!3.64e-10!57;UBERON:0007135!3.64e-10!57;UBERON:0000924!4.01e-10!173;UBERON:0006601!4.01e-10!173;UBERON:0001017!5.58e-10!82;UBERON:0007023!1.58e-09!115;UBERON:0005743!1.59e-09!86;UBERON:0002780!1.84e-09!41;UBERON:0001890!1.84e-09!41;UBERON:0006240!1.84e-09!41;UBERON:0003080!2.25e-09!42;UBERON:0004121!3.25e-09!169;UBERON:0001893!4.43e-09!34;UBERON:0002020!6.85e-09!34;UBERON:0003528!6.85e-09!34;UBERON:0002791!8.33e-09!33;UBERON:0002616!1.91e-08!59;UBERON:0001869!2.13e-08!32;UBERON:0000955!2.98e-08!69;UBERON:0006238!2.98e-08!69;UBERON:0002346!3.77e-08!90;UBERON:0003075!3.51e-07!86;UBERON:0007284!3.51e-07!86;UBERON:0002619!5.46e-07!22;UBERON:0000153!8.71e-07!129;UBERON:0007811!8.71e-07!129;UBERON:0000033!9.81e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.36e-08;32!UBERON:0001893;2.78e-08;34!UBERON:0001869;3.04e-08;32!UBERON:0003528;4.76e-08;34!UBERON:0002020;4.76e-08;34!UBERON:0002780;1.62e-07;41!UBERON:0001890;1.62e-07;41!UBERON:0002619;2.93e-07;22!UBERON:0001950;8.54e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.25e-12,89;UBERON:0001049,2.81e-10,56;UBERON:0005068,2.81e-10,56;UBERON:0006241,2.81e-10,56;UBERON:0007135,2.81e-10,56;UBERON:0001017,5.17e-10,81;UBERON:0000073,5.97e-10,53;UBERON:0002616,5.97e-10,53;UBERON:0004121,1.02e-09,171;UBERON:0000924,1.02e-09,171;UBERON:0006601,1.02e-09,171;UBERON:0002780,1.51e-09,41;UBERON:0001890,1.51e-09,41;UBERON:0003080,1.51e-09,41;UBERON:0006240,1.51e-09,41;UBERON:0007023,2.43e-09,114;UBERON:0001893,3.66e-09,34;UBERON:0003528,5.69e-09,34;UBERON:0002020,5.69e-09,34;UBERON:0002791,1.22e-08,32;UBERON:0001869,1.79e-08,32;UBERON:0000955,2.87e-08,68;UBERON:0006238,2.87e-08,68;UBERON:0002346,7.94e-08,86;UBERON:0011216,8.64e-08,223;UBERON:0010371,3.18e-07,104;UBERON:0002619,4.75e-07,22;UBERON:0003075,7.40e-07,82;UBERON:0007284,7.40e-07,82;UBERON:0003056,8.29e-07,61 | |||
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| ||
|short_description=p1@ZNF485 | |||
}} | }} |
Latest revision as of 06:25, 18 September 2015
Short description: | p1@ZNF485 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF485_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361807, ENST00000374435, ENST00000374437, ENST00000430885, ENST00000480678, NM_145312, uc010qfc.1, uc010qfd.1_5end |
EntrezGene: | ZNF485 |
HGNC: | 23440 |
UniProt: | Q8NCK3B4DSE6C9JV60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.02e-08 | 24 |
pro-B cell | 5.02e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.25e-12 | 89 |
neural tube | 2.81e-10 | 56 |
neural rod | 2.81e-10 | 56 |
future spinal cord | 2.81e-10 | 56 |
neural keel | 2.81e-10 | 56 |
central nervous system | 5.17e-10 | 81 |
regional part of nervous system | 5.97e-10 | 53 |
regional part of brain | 5.97e-10 | 53 |
ectoderm-derived structure | 1.02e-09 | 171 |
ectoderm | 1.02e-09 | 171 |
presumptive ectoderm | 1.02e-09 | 171 |
regional part of forebrain | 1.51e-09 | 41 |
forebrain | 1.51e-09 | 41 |
anterior neural tube | 1.51e-09 | 41 |
future forebrain | 1.51e-09 | 41 |
adult organism | 2.43e-09 | 114 |
telencephalon | 3.66e-09 | 34 |
brain grey matter | 5.69e-09 | 34 |
gray matter | 5.69e-09 | 34 |
regional part of telencephalon | 1.22e-08 | 32 |
cerebral hemisphere | 1.79e-08 | 32 |
brain | 2.87e-08 | 68 |
future brain | 2.87e-08 | 68 |
neurectoderm | 7.94e-08 | 86 |
organ system subdivision | 8.64e-08 | 223 |
ecto-epithelium | 3.18e-07 | 104 |
regional part of cerebral cortex | 4.75e-07 | 22 |
neural plate | 7.40e-07 | 82 |
presumptive neural plate | 7.40e-07 | 82 |
pre-chordal neural plate | 8.29e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.34e-07 | 51 |
immune system cancer | 6.34e-07 | 51 |