FFCP PHASE1:Hg19::chr10:4713606..4713610,+: Difference between revisions
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|id=chr10:4713606..4713610,+
|short_description=p@chr10:4713606..4713610,+
|description=CAGE_peak_at_chr10:4713606..4713610,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:4713606..4713610,+ | |||
|description=CAGE_peak_at_chr10:4713606..4713610,+ | |||
|id=chr10:4713606..4713610,+ | |||
|ontology_enrichment_celltype=CL:1001319!9.43e-21!1;CL:1000600!9.43e-21!1;CL:0002567!5.54e-08!3;CL:0000068!7.76e-08!3;CL:0000069!7.76e-08!3;CL:0000307!7.76e-08!3;CL:0000377!7.76e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000082;6.95e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.95e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29!UBERON:0001041;4.53e-08;30 | |||
|ontology_enrichment_disease=DOID:3111!4.22e-21!1;DOID:3603!4.22e-21!1;DOID:4074!2.73e-11!2;DOID:4905!2.73e-11!2;DOID:3498!2.73e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14!DOID:1324;1.22e-14;15!DOID:0050615;8.02e-14;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14;DOID:1324,1.22e-14,15;DOID:0050615,8.02e-14,16 | |||
|ontology_enrichment_uberon=UBERON:0002134!2.30e-21!1;UBERON:0005208!2.30e-21!1;UBERON:0005946!2.30e-21!1;UBERON:0005965!2.30e-21!1;UBERON:0002078!2.30e-21!1;UBERON:0004645!9.43e-21!1;UBERON:0001256!9.43e-21!1;UBERON:0001259!9.43e-21!1;UBERON:0002081!2.23e-11!2;UBERON:0002133!2.23e-11!2;UBERON:0001255!4.52e-11!2;UBERON:0001556!4.52e-11!2;UBERON:0003978!5.18e-08!3;UBERON:0009751!5.18e-08!3;UBERON:0004151!5.18e-08!3;UBERON:0000946!5.18e-08!3;UBERON:0002523!5.18e-08!3;UBERON:0005983!5.18e-08!3;UBERON:0004145!5.18e-08!3;UBERON:0002165!5.18e-08!3;UBERON:0002062!5.18e-08!3;UBERON:0007280!5.18e-08!3;UBERON:0000344!1.67e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.95e-12;19!UBERON:0000115;6.95e-12;19!UBERON:0002048;1.80e-10;22!UBERON:0004807;1.80e-10;22!UBERON:0000117;1.80e-10;22!UBERON:0000171;1.80e-10;22!UBERON:0000170;1.80e-10;22!UBERON:0005178;4.53e-08;34!UBERON:0000072;4.53e-08;37!UBERON:0002224;4.53e-08;34!UBERON:0005181;2.32e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.95e-12,19;UBERON:0000115,6.95e-12,19;UBERON:0002048,1.80e-10,22;UBERON:0000117,1.80e-10,22;UBERON:0000171,1.80e-10,22;UBERON:0000170,1.80e-10,22;UBERON:0005597,1.80e-10,22;UBERON:0000118,1.80e-10,22;UBERON:0004807,1.52e-08,28;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p@chr10:4713606..4713610,+ | |||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:4713606..4713610, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4713606..4713610, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.95e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.95e-12 | 19 |
lung epithelium | 6.95e-12 | 19 |
lung | 1.80e-10 | 22 |
respiratory tube | 1.80e-10 | 22 |
respiration organ | 1.80e-10 | 22 |
pair of lungs | 1.80e-10 | 22 |
lung primordium | 1.80e-10 | 22 |
lung bud | 1.80e-10 | 22 |
respiratory system epithelium | 1.52e-08 | 28 |
thoracic cavity element | 2.74e-07 | 34 |
thoracic cavity | 2.74e-07 | 34 |
thoracic segment organ | 4.03e-07 | 35 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |
lung cancer | 1.22e-14 | 15 |
respiratory system cancer | 8.02e-14 | 16 |