FFCP PHASE1:Hg19::chr16:84623843..84623875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23406 | |EntrezGene=23406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18304 | |HGNC=18304 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_BC020445_5end | |association_with_transcript=-53bp_to_BC020445_5end | ||
|cluster_id=chr16:84623843..84623875,- | |||
|coexpression_cluster_id=C842 | |||
|description=CAGE_peak_4_at_COTL1_5end | |description=CAGE_peak_4_at_COTL1_5end | ||
|id=chr16:84623843..84623875,- | |id=chr16:84623843..84623875,- | ||
|ontology_enrichment_celltype=CL:0002057!2.83e-26!42;CL:0000860!3.54e-24!45;CL:0000766!6.28e-24!76;CL:0002194!9.50e-23!63;CL:0000576!9.50e-23!63;CL:0000040!9.50e-23!63;CL:0000559!9.50e-23!63;CL:0002009!6.17e-22!65;CL:0000557!2.13e-19!71;CL:0000839!3.02e-19!70;CL:0000003!2.57e-16!722;CL:0000144!1.71e-15!625;CL:0000548!2.93e-15!679;CL:0000004!2.93e-15!679;CL:0000255!2.93e-15!679;CL:0002371!5.54e-15!591;CL:0000012!1.02e-14!682;CL:0000763!9.93e-14!112;CL:0000049!9.93e-14!112;CL:0000222!4.17e-11!119;CL:0000738!2.19e-10!140;CL:0002087!4.55e-09!119;CL:0000048!5.62e-09!430;CL:0000723!6.68e-09!436;CL:0000183!8.38e-09!59;CL:0000034!1.90e-08!444;CL:0000393!5.35e-08!60;CL:0000211!5.35e-08!60;CL:0000187!9.56e-08!54;CL:0000680!9.60e-08!57;CL:0000056!9.60e-08!57;CL:0000355!9.60e-08!57;CL:0002031!1.86e-07!124;CL:0000220!4.59e-07!246;CL:0002321!5.40e-07!248 | |ontology_enrichment_celltype=CL:0002057!2.83e-26!42;CL:0000860!3.54e-24!45;CL:0000766!6.28e-24!76;CL:0002194!9.50e-23!63;CL:0000576!9.50e-23!63;CL:0000040!9.50e-23!63;CL:0000559!9.50e-23!63;CL:0002009!6.17e-22!65;CL:0000557!2.13e-19!71;CL:0000839!3.02e-19!70;CL:0000003!2.57e-16!722;CL:0000144!1.71e-15!625;CL:0000548!2.93e-15!679;CL:0000004!2.93e-15!679;CL:0000255!2.93e-15!679;CL:0002371!5.54e-15!591;CL:0000012!1.02e-14!682;CL:0000763!9.93e-14!112;CL:0000049!9.93e-14!112;CL:0000222!4.17e-11!119;CL:0000738!2.19e-10!140;CL:0002087!4.55e-09!119;CL:0000048!5.62e-09!430;CL:0000723!6.68e-09!436;CL:0000183!8.38e-09!59;CL:0000034!1.90e-08!444;CL:0000393!5.35e-08!60;CL:0000211!5.35e-08!60;CL:0000187!9.56e-08!54;CL:0000680!9.60e-08!57;CL:0000056!9.60e-08!57;CL:0000355!9.60e-08!57;CL:0002031!1.86e-07!124;CL:0000220!4.59e-07!246;CL:0002321!5.40e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-34;33!CL:0002057;1.71e-34;33!CL:0000473;1.42e-26;39!CL:0000234;1.42e-26;39!CL:0000576;3.80e-25;48!CL:0000766;1.11e-18;69!CL:0000359;4.32e-10;32!CL:0002393;3.91e-08;6!CL:0002397;3.91e-08;6!CL:0000094;1.22e-07;8!CL:0000763;1.25e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.38e-49,42;CL:0002057,6.38e-49,42;CL:0000473,1.02e-45,48;CL:0000234,1.02e-45,48;CL:0000766,9.32e-39,72;CL:0002194,2.87e-36,59;CL:0000576,2.87e-36,59;CL:0000040,2.87e-36,59;CL:0000559,2.87e-36,59;CL:0002009,1.52e-34,61;CL:0000839,1.05e-30,66;CL:0000557,5.25e-30,67;CL:0000763,3.77e-23,108;CL:0000049,3.77e-23,108;CL:0000738,7.42e-19,136;CL:0002087,3.40e-15,115;CL:0002031,2.17e-12,120;CL:0000037,8.08e-12,168;CL:0002032,9.12e-12,161;CL:0000837,9.12e-12,161;CL:0002393,1.53e-11,9;CL:0002397,1.53e-11,9;CL:0000048,1.59e-11,427;CL:0000723,1.80e-11,433;CL:0000988,5.86e-11,177;CL:0000034,1.06e-10,441;CL:0000359,2.35e-10,32;CL:0000187,4.00e-10,55;CL:0000680,3.45e-09,58;CL:0000056,3.45e-09,58;CL:0000355,3.45e-09,58;CL:0000393,3.85e-09,61;CL:0000211,3.85e-09,61;CL:0000094,5.37e-08,8;CL:0000192,5.73e-08,43;CL:0000514,5.73e-08,43;CL:0000222,2.13e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-34;42!CL:0000049;1.07e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.46e-17!80;UBERON:0002204!2.57e-17!167;UBERON:0003081!8.51e-16!216;UBERON:0001474!1.51e-14!86;UBERON:0002193!1.72e-14!112;UBERON:0002390!1.87e-14!102;UBERON:0003061!1.87e-14!102;UBERON:0004765!1.68e-11!101;UBERON:0001434!1.68e-11!101;UBERON:0002405!9.04e-11!115;UBERON:0000926!1.15e-09!448;UBERON:0004120!1.15e-09!448;UBERON:0006603!1.15e-09!448;UBERON:0004290!1.65e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p4@COTL1 | |short_description=p4@COTL1 | ||
}} | }} |
Latest revision as of 03:57, 18 September 2015
Short description: | p4@COTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COTL1_5end |
Coexpression cluster: | C842_Neutrophils_CD14CD16_CD14_Eosinophils_migratory_Mesenchymal_Fibroblast |
Association with transcript: | -53bp_to_BC020445_5end |
EntrezGene: | COTL1 |
HGNC: | 18304 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.78e-27 | 167 |
bone marrow | 8.15e-26 | 76 |
lateral plate mesoderm | 2.45e-23 | 203 |
bone element | 9.14e-23 | 82 |
hematopoietic system | 1.68e-21 | 98 |
blood island | 1.68e-21 | 98 |
skeletal element | 2.97e-21 | 90 |
immune system | 2.23e-20 | 93 |
hemolymphoid system | 6.04e-20 | 108 |
skeletal system | 2.24e-18 | 100 |
mesoderm | 1.14e-15 | 315 |
mesoderm-derived structure | 1.14e-15 | 315 |
presumptive mesoderm | 1.14e-15 | 315 |
epithelial vesicle | 4.30e-13 | 78 |
somite | 1.07e-09 | 71 |
presomitic mesoderm | 1.07e-09 | 71 |
presumptive segmental plate | 1.07e-09 | 71 |
dermomyotome | 1.07e-09 | 71 |
trunk paraxial mesoderm | 1.07e-09 | 71 |
paraxial mesoderm | 1.96e-09 | 72 |
presumptive paraxial mesoderm | 1.96e-09 | 72 |
dense mesenchyme tissue | 3.51e-09 | 73 |
multilaminar epithelium | 2.76e-08 | 83 |
skeletal muscle tissue | 4.24e-08 | 62 |
striated muscle tissue | 4.24e-08 | 62 |
myotome | 4.24e-08 | 62 |
muscle tissue | 1.30e-07 | 64 |
musculature | 1.30e-07 | 64 |
musculature of body | 1.30e-07 | 64 |