FFCP PHASE1:Hg19::chr17:1248213..1248222,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1248213..1248222,+ | |||
|description=CAGE_peak_at_chr17:1248213..1248222,+ | |description=CAGE_peak_at_chr17:1248213..1248222,+ | ||
|id=chr17:1248213..1248222,+ | |id=chr17:1248213..1248222,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.15e-23;6!CL:0000404;1.15e-23;6!CL:0002363;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.24e-23,6;CL:0000031,1.24e-23,6;CL:0000404,1.24e-23,6;CL:0000047,6.63e-18,8;CL:0002363,8.09e-09,2;CL:0000008,8.09e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.15e-23;6!CL:0000008;5.93e-09;2 | |||
|ontology_enrichment_disease=DOID:162!6.70e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.41e-16;1!DOID:74;5.93e-09;2!DOID:3095;7.94e-07;22!DOID:2994;7.94e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,6.47e-17,1;DOID:74,4.02e-09,2;DOID:3095,7.63e-07,22;DOID:2994,7.63e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.93e-09;2!UBERON:0003566;5.93e-09;2!UBERON:0001777;5.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.34e-09,2;UBERON:0003566,8.09e-09,2;UBERON:0001777,8.09e-09,2 | |||
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| ||
|short_description=p@chr17:1248213..1248222,+ | |short_description=p@chr17:1248213..1248222,+ | ||
}} | }} |
Latest revision as of 13:48, 25 July 2015
Short description: | p@chr17:1248213..1248222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1248213..1248222, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.24e-23 | 6 |
neuroblast | 1.24e-23 | 6 |
electrically signaling cell | 1.24e-23 | 6 |
neuronal stem cell | 6.63e-18 | 8 |
keratocyte | 8.09e-09 | 2 |
migratory cranial neural crest cell | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.34e-09 | 2 |
head connective tissue | 8.09e-09 | 2 |
substantia propria of cornea | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 6.47e-17 | 1 |
hematopoietic system disease | 4.02e-09 | 2 |
germ cell and embryonal cancer | 7.63e-07 | 22 |
germ cell cancer | 7.63e-07 | 22 |