FFCP PHASE1:Hg19::chr10:62149979..62149980,-: Difference between revisions
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|id=chr10:62149979..62149980,-
|short_description=p59@ANK3
|description=CAGE_peak_59_at_ANK3_5end
|association_with_transcript=-345bp_to_NM_020987_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=288 | |EntrezGene=288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=494 | |HGNC=494 | ||
|TSSclassifier=strong | |||
|UniProt=Q12955 | |UniProt=Q12955 | ||
|association_with_transcript=-345bp_to_NM_020987_5end | |||
|cluster_id=chr10:62149979..62149980,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_59_at_ANK3_5end | |||
|id=chr10:62149979..62149980,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.55e-98;1!UBERON:0003056;5.04e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p59@ANK3 | |||
}} | }} |
Latest revision as of 16:46, 18 September 2015
Short description: | p59@ANK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_59_at_ANK3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -345bp_to_NM_020987_5end |
EntrezGene: | ANK3 |
HGNC: | 494 |
UniProt: | Q12955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 9.37e-99 | 1 |
midbrain nucleus | 9.37e-99 | 1 |
regional part of midbrain | 9.37e-99 | 1 |
midbrain | 9.37e-99 | 1 |
presumptive midbrain | 9.37e-99 | 1 |
midbrain neural tube | 9.37e-99 | 1 |
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
telencephalic nucleus | 1.65e-15 | 7 |
basal ganglion | 2.19e-12 | 9 |
neural nucleus | 2.19e-12 | 9 |
nuclear complex of neuraxis | 2.19e-12 | 9 |
nucleus of brain | 2.19e-12 | 9 |
aggregate regional part of brain | 2.19e-12 | 9 |
collection of basal ganglia | 2.19e-12 | 9 |
cerebral subcortex | 2.19e-12 | 9 |
peripheral nervous system | 2.45e-12 | 8 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
pre-chordal neural plate | 1.20e-07 | 61 |