FFCP PHASE1:Hg19::chr12:10095959..10095995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_uc001qwo.1_5end | |association_with_transcript=41bp_to_uc001qwo.1_5end | ||
|cluster_id=chr12:10095959..10095995,- | |||
|description=CAGE_peak_3_at_uc001qwo.1_5end | |description=CAGE_peak_3_at_uc001qwo.1_5end | ||
|id=chr12:10095959..10095995,- | |id=chr12:10095959..10095995,- | ||
|ontology_enrichment_celltype=CL:0002057!1.43e-31!42;CL:0000860!8.51e-29!45;CL:0000766!9.05e-28!76;CL:0000763!1.34e-25!112;CL:0000049!1.34e-25!112;CL:0000839!1.55e-25!70;CL:0002032!1.25e-24!165;CL:0000837!1.25e-24!165;CL:0000037!5.94e-24!172;CL:0000566!5.94e-24!172;CL:0000557!2.06e-23!71;CL:0000738!3.76e-23!140;CL:0002031!9.89e-22!124;CL:0000988!1.23e-21!182;CL:0002194!1.53e-21!63;CL:0000576!1.53e-21!63;CL:0000040!1.53e-21!63;CL:0000559!1.53e-21!63;CL:0002009!1.42e-20!65;CL:0002087!7.00e-19!119;CL:0002393!6.29e-09!9;CL:0002397!6.29e-09!9 | |ontology_enrichment_celltype=CL:0002057!1.43e-31!42;CL:0000860!8.51e-29!45;CL:0000766!9.05e-28!76;CL:0000763!1.34e-25!112;CL:0000049!1.34e-25!112;CL:0000839!1.55e-25!70;CL:0002032!1.25e-24!165;CL:0000837!1.25e-24!165;CL:0000037!5.94e-24!172;CL:0000566!5.94e-24!172;CL:0000557!2.06e-23!71;CL:0000738!3.76e-23!140;CL:0002031!9.89e-22!124;CL:0000988!1.23e-21!182;CL:0002194!1.53e-21!63;CL:0000576!1.53e-21!63;CL:0000040!1.53e-21!63;CL:0000559!1.53e-21!63;CL:0002009!1.42e-20!65;CL:0002087!7.00e-19!119;CL:0002393!6.29e-09!9;CL:0002397!6.29e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.64e-22;33!CL:0002057;1.64e-22;33!CL:0000473;9.31e-16;39!CL:0000234;9.31e-16;39!CL:0000576;7.64e-15;48!CL:0000766;2.78e-14;69!CL:0000763;1.57e-08;100!CL:0000094;1.10e-07;8!CL:0002553;1.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.17e-26,42;CL:0002057,1.17e-26,42;CL:0000473,5.61e-23,48;CL:0000234,5.61e-23,48;CL:0000766,1.81e-21,72;CL:0000763,2.43e-21,108;CL:0000049,2.43e-21,108;CL:0002194,8.04e-18,59;CL:0000576,8.04e-18,59;CL:0000040,8.04e-18,59;CL:0000559,8.04e-18,59;CL:0002009,3.72e-17,61;CL:0000839,1.15e-15,66;CL:0000557,2.14e-15,67;CL:0002032,2.03e-14,161;CL:0000837,2.03e-14,161;CL:0000037,1.23e-13,168;CL:0000988,1.01e-12,177;CL:0000738,3.64e-11,136;CL:0002087,3.62e-09,115;CL:0002031,1.15e-08,120;CL:0000094,1.22e-07,8;CL:0002553,1.48e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.58e-19;42!UBERON:0005425;8.28e-08;1!UBERON:0006222;1.97e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.77e-22!102;UBERON:0003061!2.77e-22!102;UBERON:0002371!1.53e-19!80;UBERON:0002193!4.12e-19!112;UBERON:0001474!2.01e-17!86;UBERON:0004765!3.13e-14!101;UBERON:0001434!3.13e-14!101;UBERON:0001893!8.12e-13!34;UBERON:0002020!9.46e-13!34;UBERON:0003528!9.46e-13!34;UBERON:0002405!9.82e-13!115;UBERON:0001049!1.46e-12!57;UBERON:0005068!1.46e-12!57;UBERON:0006241!1.46e-12!57;UBERON:0007135!1.46e-12!57;UBERON:0007023!2.29e-12!115;UBERON:0002616!6.66e-12!59;UBERON:0002791!8.26e-12!33;UBERON:0002780!3.29e-11!41;UBERON:0001890!3.29e-11!41;UBERON:0006240!3.29e-11!41;UBERON:0001869!6.59e-11!32;UBERON:0003080!8.05e-11!42;UBERON:0002619!2.46e-10!22;UBERON:0001950!7.28e-10!20;UBERON:0000955!7.90e-10!69;UBERON:0006238!7.90e-10!69;UBERON:0000956!9.43e-09!25;UBERON:0000203!9.43e-09!25;UBERON:0001017!5.29e-08!82;UBERON:0000073!2.33e-07!94;UBERON:0001016!2.33e-07!94;UBERON:0005743!2.49e-07!86;UBERON:0002298!7.83e-07!8 | |ontology_enrichment_uberon=UBERON:0002390!2.77e-22!102;UBERON:0003061!2.77e-22!102;UBERON:0002371!1.53e-19!80;UBERON:0002193!4.12e-19!112;UBERON:0001474!2.01e-17!86;UBERON:0004765!3.13e-14!101;UBERON:0001434!3.13e-14!101;UBERON:0001893!8.12e-13!34;UBERON:0002020!9.46e-13!34;UBERON:0003528!9.46e-13!34;UBERON:0002405!9.82e-13!115;UBERON:0001049!1.46e-12!57;UBERON:0005068!1.46e-12!57;UBERON:0006241!1.46e-12!57;UBERON:0007135!1.46e-12!57;UBERON:0007023!2.29e-12!115;UBERON:0002616!6.66e-12!59;UBERON:0002791!8.26e-12!33;UBERON:0002780!3.29e-11!41;UBERON:0001890!3.29e-11!41;UBERON:0006240!3.29e-11!41;UBERON:0001869!6.59e-11!32;UBERON:0003080!8.05e-11!42;UBERON:0002619!2.46e-10!22;UBERON:0001950!7.28e-10!20;UBERON:0000955!7.90e-10!69;UBERON:0006238!7.90e-10!69;UBERON:0000956!9.43e-09!25;UBERON:0000203!9.43e-09!25;UBERON:0001017!5.29e-08!82;UBERON:0000073!2.33e-07!94;UBERON:0001016!2.33e-07!94;UBERON:0005743!2.49e-07!86;UBERON:0002298!7.83e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.28e-08;1!UBERON:0001785;8.28e-08;1!UBERON:0002464;8.28e-08;1!UBERON:0004904;8.28e-08;1!UBERON:0001021;8.28e-08;1!UBERON:0000178;5.78e-07;15!UBERON:0000179;5.78e-07;15!UBERON:0000463;5.78e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.65e-17,98;UBERON:0003061,5.65e-17,98;UBERON:0002193,4.46e-15,108;UBERON:0002371,2.86e-13,76;UBERON:0001474,4.13e-12,82;UBERON:0004765,8.38e-11,90;UBERON:0002405,2.27e-10,93;UBERON:0001434,1.84e-09,100;UBERON:0000941,8.28e-08,1;UBERON:0001785,8.28e-08,1;UBERON:0002464,8.28e-08,1;UBERON:0004904,8.28e-08,1;UBERON:0001021,8.28e-08,1;UBERON:0003902,8.28e-08,1;UBERON:0005425,8.28e-08,1;UBERON:0000178,5.87e-07,15;UBERON:0000179,5.87e-07,15;UBERON:0000463,5.87e-07,15 | |||
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|short_description=p3@uc001qwo.1 | |short_description=p3@uc001qwo.1 | ||
}} | }} |
Latest revision as of 03:55, 24 July 2015
Short description: | p3@uc001qwo.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc001qwo.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_uc001qwo.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.17e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-26 | 42 |
defensive cell | 5.61e-23 | 48 |
phagocyte | 5.61e-23 | 48 |
myeloid leukocyte | 1.81e-21 | 72 |
myeloid cell | 2.43e-21 | 108 |
common myeloid progenitor | 2.43e-21 | 108 |
monopoietic cell | 8.04e-18 | 59 |
monocyte | 8.04e-18 | 59 |
monoblast | 8.04e-18 | 59 |
promonocyte | 8.04e-18 | 59 |
macrophage dendritic cell progenitor | 3.72e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.15e-15 | 66 |
granulocyte monocyte progenitor cell | 2.14e-15 | 67 |
hematopoietic oligopotent progenitor cell | 2.03e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-14 | 161 |
hematopoietic stem cell | 1.23e-13 | 168 |
hematopoietic cell | 1.01e-12 | 177 |
leukocyte | 3.64e-11 | 136 |
nongranular leukocyte | 3.62e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
granulocyte | 1.22e-07 | 8 |
lung fibroblast | 1.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.65e-17 | 98 |
blood island | 5.65e-17 | 98 |
hemolymphoid system | 4.46e-15 | 108 |
bone marrow | 2.86e-13 | 76 |
bone element | 4.13e-12 | 82 |
skeletal element | 8.38e-11 | 90 |
immune system | 2.27e-10 | 93 |
skeletal system | 1.84e-09 | 100 |
cranial nerve II | 8.28e-08 | 1 |
cranial nerve | 8.28e-08 | 1 |
nerve trunk | 8.28e-08 | 1 |
nerve connecting eye with brain | 8.28e-08 | 1 |
nerve | 8.28e-08 | 1 |
retinal neural layer | 8.28e-08 | 1 |
presumptive neural retina | 8.28e-08 | 1 |
blood | 5.87e-07 | 15 |
haemolymphatic fluid | 5.87e-07 | 15 |
organism substance | 5.87e-07 | 15 |