FFCP PHASE1:Hg19::chr17:26890530..26890545,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:26890530..26890545,- | |||
|coexpression_cluster_id=C889 | |||
|description=CAGE_peak_at_chr17:26890530..26890545,- | |description=CAGE_peak_at_chr17:26890530..26890545,- | ||
|id=chr17:26890530..26890545,- | |id=chr17:26890530..26890545,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;3.92e-29;4!CL:0002097;1.33e-15;2!CL:0002575;1.54e-15;2!CL:0000650;2.21e-15;2!CL:1000500;2.21e-15;2!CL:1000618;2.21e-15;2!CL:1001318;2.21e-15;2!CL:0002173;2.21e-15;2!CL:0000077;3.38e-14;19!CL:0000174;7.42e-11;3!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,4.86e-29,4;CL:0002097,1.33e-15,2;CL:0002575,1.54e-15,2;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:0000077,3.31e-14,19;CL:0000174,7.42e-11,3;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;2.21e-15;2!UBERON:0003838;2.21e-15;2!UBERON:0003586;2.21e-15;2!UBERON:0005169;2.21e-15;2!UBERON:0002321;2.21e-15;2!UBERON:0005215;2.21e-15;2!UBERON:0002303;2.21e-15;2!UBERON:0002319;2.21e-15;2!UBERON:0002369;7.42e-11;3!UBERON:0001235;7.42e-11;3!UBERON:0006858;7.42e-11;3!UBERON:0001851;1.50e-08;15!UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0003891;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0002369,7.42e-11,3;UBERON:0001235,7.42e-11,3;UBERON:0006858,7.42e-11,3;UBERON:0001851,1.59e-08,15;UBERON:0010077,2.43e-08,4;UBERON:0005389,2.43e-08,4;UBERON:0000484,2.43e-08,4;UBERON:0002546,2.43e-08,4;UBERON:0000965,2.43e-08,4;UBERON:0001803,2.43e-08,4;UBERON:0003073,2.43e-08,4;UBERON:0005426,2.43e-08,4;UBERON:0003891,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,2.40200396667599,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0.984043937099117,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.307007349452259,0.689182862422653,0,0,0.255679882248303,0.712256285173899,0,0.384380134730212,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.54323685961004,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,3.64550705337374,0,0,0,0,0.179088841081487,1.23520578864389,0.219284049578707,0.176689145945881,0,0,0,21.7621115290655,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0.203977659483963,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,2.40200396667599,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0.984043937099117,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.307007349452259,0.689182862422653,0,0,0.255679882248303,0.712256285173899,0,0.384380134730212,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.54323685961004,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,3.64550705337374,0,0,0,0,0.179088841081487,1.23520578864389,0.219284049578707,0.176689145945881,0,0,0,21.7621115290655,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0.203977659483963,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr17:26890530..26890545,- | |short_description=p@chr17:26890530..26890545,- | ||
}} | }} |
Latest revision as of 14:59, 25 July 2015
Short description: | p@chr17:26890530..26890545, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:26890530..26890545, - |
Coexpression cluster: | C889_mesothelioma_mesodermal_lung_placenta_umbilical_Urothelial_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 4.86e-29 | 4 |
cortical cell of adrenal gland | 1.33e-15 | 2 |
central nervous system pericyte | 1.54e-15 | 2 |
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
mesothelial cell | 3.31e-14 | 19 |
steroid hormone secreting cell | 7.42e-11 | 3 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 2.74e-15 | 2 |
abdominal segment connective tissue | 2.74e-15 | 2 |
trunk connective tissue | 2.74e-15 | 2 |
interstitial tissue | 2.74e-15 | 2 |
extraglomerular mesangium | 2.74e-15 | 2 |
kidney interstitium | 2.74e-15 | 2 |
juxtaglomerular apparatus | 2.74e-15 | 2 |
mesangium | 2.74e-15 | 2 |
adrenal gland | 7.42e-11 | 3 |
adrenal cortex | 7.42e-11 | 3 |
adrenal/interrenal gland | 7.42e-11 | 3 |
cortex | 1.59e-08 | 15 |
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |
stroma | 2.61e-08 | 4 |