FFCP PHASE1:Hg19::chr12:11002063..11002081,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11272 | |EntrezGene=11272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18020 | |HGNC=18020 | ||
|TSSclassifier=strong | |||
|UniProt=Q16378,E7ESM0,F5H178,F5H0D7 | |UniProt=Q16378,E7ESM0,F5H178,F5H0D7 | ||
|association_with_transcript=0bp_to_ENST00000228811,ENST00000431566,ENST00000540107,ENST00000542658,ENST00000544994,NM_001098538,NM_007244,uc001qyz.3,uc001qza.3,uc009zhq.1_5end | |association_with_transcript=0bp_to_ENST00000228811,ENST00000431566,ENST00000540107,ENST00000542658,ENST00000544994,NM_001098538,NM_007244,uc001qyz.3,uc001qza.3,uc009zhq.1_5end | ||
|cluster_id=chr12:11002063..11002081,- | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_1_at_PRR4_5end | |description=CAGE_peak_1_at_PRR4_5end | ||
|id=chr12:11002063..11002081,- | |id=chr12:11002063..11002081,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.71e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.81e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-19!115;UBERON:0003408!6.22e-08!10;UBERON:0002530!9.25e-08!59;UBERON:0001044!4.96e-07!6;UBERON:0003293!4.96e-07!6;UBERON:0003294!4.96e-07!6;UBERON:0010047!4.96e-07!6;UBERON:0000167!4.96e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!3.70e-19!115;UBERON:0003408!6.22e-08!10;UBERON:0002530!9.25e-08!59;UBERON:0001044!4.96e-07!6;UBERON:0003293!4.96e-07!6;UBERON:0003294!4.96e-07!6;UBERON:0010047!4.96e-07!6;UBERON:0000167!4.96e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.83e-10;6!UBERON:0003293;1.83e-10;6!UBERON:0003294;1.83e-10;6!UBERON:0010047;1.83e-10;6!UBERON:0003408;1.83e-10;6!UBERON:0000167;1.83e-10;6!UBERON:0004921;1.52e-09;33!UBERON:0003127;3.79e-09;2!UBERON:0001041;4.23e-09;14!UBERON:0001829;5.16e-09;2!UBERON:0000341;6.50e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.70e-10,6;UBERON:0003293,1.70e-10,6;UBERON:0003294,1.70e-10,6;UBERON:0010047,1.70e-10,6;UBERON:0000167,1.70e-10,6;UBERON:0004921,1.23e-09,118;UBERON:0007023,2.52e-09,114;UBERON:0003127,3.79e-09,2;UBERON:0001829,5.16e-09,2;UBERON:0000341,6.50e-09,2;UBERON:0001007,1.26e-08,145;UBERON:0001555,1.26e-08,145;UBERON:0007026,1.26e-08,145;UBERON:0000166,1.16e-07,22;UBERON:0001041,2.41e-07,87;UBERON:0004119,2.55e-07,160;UBERON:0000925,2.55e-07,160;UBERON:0006595,2.55e-07,160;UBERON:0000161,6.20e-07,36;UBERON:0001004,6.68e-07,74 | |||
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| ||
|short_description=p1@PRR4 | |short_description=p1@PRR4 | ||
}} | }} |
Latest revision as of 07:06, 16 September 2015
Short description: | p1@PRR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRR4_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000228811, ENST00000431566, ENST00000540107, ENST00000542658, ENST00000544994, NM_001098538, NM_007244, uc001qyz.3, uc001qza.3, uc009zhq.1_5end |
EntrezGene: | PRR4 |
HGNC: | 18020 |
UniProt: | Q16378E7ESM0F5H178F5H0D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.70e-10 | 6 |
gland of oral region | 1.70e-10 | 6 |
gland of foregut | 1.70e-10 | 6 |
oral gland | 1.70e-10 | 6 |
oral cavity | 1.70e-10 | 6 |
subdivision of digestive tract | 1.23e-09 | 118 |
adult organism | 2.52e-09 | 114 |
open tracheal system trachea | 3.79e-09 | 2 |
major salivary gland | 5.16e-09 | 2 |
throat | 6.50e-09 | 2 |
digestive system | 1.26e-08 | 145 |
digestive tract | 1.26e-08 | 145 |
primitive gut | 1.26e-08 | 145 |
oral opening | 1.16e-07 | 22 |
foregut | 2.41e-07 | 87 |
endoderm-derived structure | 2.55e-07 | 160 |
endoderm | 2.55e-07 | 160 |
presumptive endoderm | 2.55e-07 | 160 |
orifice | 6.20e-07 | 36 |
respiratory system | 6.68e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.81e-08 | 2 |