FFCP PHASE1:Hg19::chr12:11463324..11463340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5545 | |EntrezGene=5545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9340 | |HGNC=9340 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAL0,P10163 | |UniProt=E9PAL0,P10163 | ||
|association_with_transcript=25bp_to_ENST00000279575,ENST00000535904,NM_002723,uc001qzf.1,uc001qzt.2_5end | |association_with_transcript=25bp_to_ENST00000279575,ENST00000535904,NM_002723,uc001qzf.1,uc001qzt.2_5end | ||
|cluster_id=chr12:11463324..11463340,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_2_at_PRB4_5end | |description=CAGE_peak_2_at_PRB4_5end | ||
|id=chr12:11463324..11463340,- | |id=chr12:11463324..11463340,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0008814;7.14e-26;2!UBERON:0010056;7.14e-26;2!UBERON:0006965;7.14e-26;2!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001831!8.95e-20!1;UBERON:0001567!8.95e-20!1;UBERON:0008801!8.95e-20!1;UBERON:0001044!3.55e-13!6;UBERON:0003293!3.55e-13!6;UBERON:0003294!3.55e-13!6;UBERON:0010047!3.55e-13!6;UBERON:0000167!3.55e-13!6;UBERON:0001829!1.43e-10!2;UBERON:0004089!1.43e-10!2;UBERON:0003127!1.57e-10!2;UBERON:0000341!2.49e-10!2;UBERON:0001255!3.27e-10!2;UBERON:0001556!3.27e-10!2;UBERON:0000078!8.98e-10!18;UBERON:0007023!1.25e-09!115;UBERON:0000161!1.25e-08!35;UBERON:0000166!1.85e-08!21;UBERON:0003408!2.82e-08!10;UBERON:0001723!2.19e-07!3;UBERON:0001033!2.19e-07!3;UBERON:0010056!2.19e-07!3 | |ontology_enrichment_uberon=UBERON:0001831!8.95e-20!1;UBERON:0001567!8.95e-20!1;UBERON:0008801!8.95e-20!1;UBERON:0001044!3.55e-13!6;UBERON:0003293!3.55e-13!6;UBERON:0003294!3.55e-13!6;UBERON:0010047!3.55e-13!6;UBERON:0000167!3.55e-13!6;UBERON:0001829!1.43e-10!2;UBERON:0004089!1.43e-10!2;UBERON:0003127!1.57e-10!2;UBERON:0000341!2.49e-10!2;UBERON:0001255!3.27e-10!2;UBERON:0001556!3.27e-10!2;UBERON:0000078!8.98e-10!18;UBERON:0007023!1.25e-09!115;UBERON:0000161!1.25e-08!35;UBERON:0000166!1.85e-08!21;UBERON:0003408!2.82e-08!10;UBERON:0001723!2.19e-07!3;UBERON:0001033!2.19e-07!3;UBERON:0010056!2.19e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001829;4.32e-26;2!UBERON:0004089;4.32e-26;2!UBERON:0003127;7.14e-26;2!UBERON:0001723;9.45e-18;3!UBERON:0001033;9.45e-18;3!UBERON:0001044;1.22e-09;6!UBERON:0003293;1.22e-09;6!UBERON:0003294;1.22e-09;6!UBERON:0010047;1.22e-09;6!UBERON:0003408;1.22e-09;6!UBERON:0000167;1.22e-09;6!UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7!UBERON:0000165;3.78e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001829,4.32e-26,2;UBERON:0004089,4.32e-26,2;UBERON:0003127,5.56e-26,2;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3;UBERON:0000166,4.53e-10,22;UBERON:0001044,1.22e-09,6;UBERON:0003293,1.22e-09,6;UBERON:0003294,1.22e-09,6;UBERON:0010047,1.22e-09,6;UBERON:0000167,1.22e-09,6;UBERON:0003126,2.03e-08,7;UBERON:0001005,2.03e-08,7;UBERON:0000165,6.91e-08,29;UBERON:0000930,6.91e-08,29;UBERON:0007023,8.86e-08,114;UBERON:0001004,6.64e-07,74 | |||
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|short_description=p2@PRB4 | |short_description=p2@PRB4 | ||
}} | }} |
Latest revision as of 13:56, 16 September 2015
Short description: | p2@PRB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRB4_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 25bp_to_ENST00000279575, ENST00000535904, NM_002723, uc001qzf.1, uc001qzt.2_5end |
EntrezGene: | PRB4 |
HGNC: | 9340 |
UniProt: | E9PAL0P10163 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
major salivary gland | 4.32e-26 | 2 |
midface | 4.32e-26 | 2 |
open tracheal system trachea | 5.56e-26 | 2 |
tongue | 1.12e-17 | 3 |
gustatory system | 1.12e-17 | 3 |
future tongue | 1.12e-17 | 3 |
oral opening | 4.53e-10 | 22 |
saliva-secreting gland | 1.22e-09 | 6 |
gland of oral region | 1.22e-09 | 6 |
gland of foregut | 1.22e-09 | 6 |
oral gland | 1.22e-09 | 6 |
oral cavity | 1.22e-09 | 6 |
trachea | 2.03e-08 | 7 |
respiratory airway | 2.03e-08 | 7 |
mouth | 6.91e-08 | 29 |
stomodeum | 6.91e-08 | 29 |
adult organism | 8.86e-08 | 114 |
respiratory system | 6.64e-07 | 74 |