FFCP PHASE1:Hg19::chr10:73730296..73730317,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:73730296..73730317,+
|short_description=p@chr10:73730296..73730317,+
|description=CAGE_peak_at_chr10:73730296..73730317,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:73730296..73730317,+ | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_at_chr10:73730296..73730317,+ | |||
|id=chr10:73730296..73730317,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.77e-08!43;CL:0000223!5.90e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002623;6.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,6.73e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.14e-23!115;UBERON:0000481!2.33e-16!347;UBERON:0001049!2.22e-15!57;UBERON:0005068!2.22e-15!57;UBERON:0006241!2.22e-15!57;UBERON:0007135!2.22e-15!57;UBERON:0000475!3.82e-14!365;UBERON:0000062!1.39e-13!511;UBERON:0000153!4.55e-12!129;UBERON:0007811!4.55e-12!129;UBERON:0002616!2.41e-11!59;UBERON:0003075!2.71e-11!86;UBERON:0007284!2.71e-11!86;UBERON:0000468!6.92e-11!659;UBERON:0001017!8.85e-11!82;UBERON:0005743!9.78e-11!86;UBERON:0000033!1.09e-10!123;UBERON:0004121!1.67e-10!169;UBERON:0000922!1.82e-10!612;UBERON:0000467!2.54e-10!625;UBERON:0000480!3.29e-10!626;UBERON:0004119!3.60e-10!169;UBERON:0000925!3.60e-10!169;UBERON:0006595!3.60e-10!169;UBERON:0002346!4.08e-10!90;UBERON:0000923!4.29e-10!604;UBERON:0005291!4.29e-10!604;UBERON:0006598!4.29e-10!604;UBERON:0002532!4.29e-10!604;UBERON:0000955!4.41e-10!69;UBERON:0006238!4.41e-10!69;UBERON:0002050!5.55e-10!605;UBERON:0005423!5.55e-10!605;UBERON:0000924!9.34e-10!173;UBERON:0006601!9.34e-10!173;UBERON:0003076!1.31e-09!15;UBERON:0003057!1.31e-09!15;UBERON:0000064!1.48e-09!219;UBERON:0000077!2.19e-09!130;UBERON:0001004!2.98e-09!72;UBERON:0000477!3.58e-09!286;UBERON:0001041!6.74e-09!98;UBERON:0001007!1.51e-08!155;UBERON:0001555!1.51e-08!155;UBERON:0007026!1.51e-08!155;UBERON:0000073!2.27e-08!94;UBERON:0001016!2.27e-08!94;UBERON:0004921!2.41e-08!129;UBERON:0004185!2.41e-08!129;UBERON:0003080!2.49e-08!42;UBERON:0002298!4.94e-08!8;UBERON:0000065!8.44e-08!53;UBERON:0002780!1.05e-07!41;UBERON:0001890!1.05e-07!41;UBERON:0006240!1.05e-07!41;UBERON:0005177!1.64e-07!107;UBERON:0004733!1.67e-07!12;UBERON:0002028!1.67e-07!12;UBERON:0007277!1.67e-07!12;UBERON:0003104!1.75e-07!238;UBERON:0009142!1.75e-07!238;UBERON:0000489!1.93e-07!32;UBERON:0001557!4.64e-07!19;UBERON:0000483!8.96e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.28e-08;6!UBERON:0006947;6.10e-07;3!UBERON:0004054;6.10e-07;3!UBERON:0001896;7.18e-07;3!UBERON:0005290;7.18e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,6.71e-09,6;UBERON:0007023,7.27e-09,114;UBERON:0003076,5.06e-08,15;UBERON:0003057,5.06e-08,15;UBERON:0001004,5.46e-08,74;UBERON:0000065,3.79e-07,54;UBERON:0001896,4.56e-07,3;UBERON:0005290,4.56e-07,3;UBERON:0010096,4.56e-07,3;UBERON:0006947,5.60e-07,3;UBERON:0004054,5.60e-07,3;UBERON:0001041,6.31e-07,87;UBERON:0003408,6.67e-07,10 | |||
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| ||
|short_description=p@chr10:73730296..73730317,+ | |||
}} | }} |
Latest revision as of 15:23, 23 July 2015
Short description: | p@chr10:73730296..73730317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73730296..73730317, + |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 6.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brainstem | 6.71e-09 | 6 |
adult organism | 7.27e-09 | 114 |
posterior neural tube | 5.06e-08 | 15 |
chordal neural plate | 5.06e-08 | 15 |
respiratory system | 5.46e-08 | 74 |
respiratory tract | 3.79e-07 | 54 |
medulla oblongata | 4.56e-07 | 3 |
myelencephalon | 4.56e-07 | 3 |
future myelencephalon | 4.56e-07 | 3 |
male genital duct | 5.60e-07 | 3 |
internal male genitalia | 5.60e-07 | 3 |
foregut | 6.31e-07 | 87 |
gland of gut | 6.67e-07 | 10 |