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FFCP PHASE1:Mm9::chrX:33735945..33735954,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72693
|EntrezGene=72693
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=Q9CZA5
|UniProt=Q9CZA5
|association_with_transcript=0bp_to_ENSMUST00000115257_5end
|association_with_transcript=0bp_to_ENSMUST00000115257_5end
|cluster_id=chrX:33735945..33735954,+
|description=CAGE_peak_2_at_Zcchc12_5end
|description=CAGE_peak_2_at_Zcchc12_5end
|id=chrX:33735945..33735954,+
|id=chrX:33735945..33735954,+
|ontology_enrichment_celltype=CL:0000117!1.45e-14!23;CL:0000337!1.45e-14!23;CL:0000540!1.97e-13!33;CL:0000047!1.97e-13!33;CL:0000031!1.97e-13!33;CL:0000404!1.97e-13!33;CL:0002319!1.29e-09!43;CL:0000393!1.82e-09!39;CL:0000211!1.82e-09!39;CL:0000221!4.07e-09!44;CL:0000133!4.07e-09!44
|ontology_enrichment_celltype=CL:0000117!1.45e-14!23;CL:0000337!1.45e-14!23;CL:0000540!1.97e-13!33;CL:0000047!1.97e-13!33;CL:0000031!1.97e-13!33;CL:0000404!1.97e-13!33;CL:0002319!1.29e-09!43;CL:0000393!1.82e-09!39;CL:0000211!1.82e-09!39;CL:0000221!4.07e-09!44;CL:0000133!4.07e-09!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.35e-24,23;CL:0000337,2.35e-24,23;CL:0000540,8.48e-17,33;CL:0000047,8.48e-17,33;CL:0000031,8.48e-17,33;CL:0000404,8.48e-17,33;CL:0000393,2.52e-13,39;CL:0000211,2.52e-13,39;CL:0002319,1.46e-11,43;CL:0000221,3.57e-11,44;CL:0000133,3.57e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.49e-20!73;UBERON:0005743!1.49e-20!73;UBERON:0000073!6.77e-20!75;UBERON:0001016!6.77e-20!75;UBERON:0002346!2.16e-19!71;UBERON:0003075!2.16e-19!71;UBERON:0007284!2.16e-19!71;UBERON:0004121!4.33e-18!102;UBERON:0000924!4.33e-18!102;UBERON:0006601!4.33e-18!102;UBERON:0000033!7.50e-17!63;UBERON:0001049!1.26e-16!52;UBERON:0005068!1.26e-16!52;UBERON:0006241!1.26e-16!52;UBERON:0007135!1.26e-16!52;UBERON:0000955!5.78e-15!50;UBERON:0006238!5.78e-15!50;UBERON:0003056!1.90e-14!49;UBERON:0002616!2.48e-14!49;UBERON:0002020!1.08e-13!34;UBERON:0003080!6.74e-12!40;UBERON:0002780!3.39e-11!39;UBERON:0001890!3.39e-11!39;UBERON:0006240!3.39e-11!39;UBERON:0002791!4.33e-10!29;UBERON:0003528!4.33e-10!29;UBERON:0001893!4.33e-10!29;UBERON:0007811!7.94e-09!86;UBERON:0000153!1.23e-08!94;UBERON:0002420!2.32e-07!8;UBERON:0007245!2.32e-07!8;UBERON:0010009!2.32e-07!8;UBERON:0010011!2.32e-07!8;UBERON:0000454!2.32e-07!8
|ontology_enrichment_uberon=UBERON:0001017!1.49e-20!73;UBERON:0005743!1.49e-20!73;UBERON:0000073!6.77e-20!75;UBERON:0001016!6.77e-20!75;UBERON:0002346!2.16e-19!71;UBERON:0003075!2.16e-19!71;UBERON:0007284!2.16e-19!71;UBERON:0004121!4.33e-18!102;UBERON:0000924!4.33e-18!102;UBERON:0006601!4.33e-18!102;UBERON:0000033!7.50e-17!63;UBERON:0001049!1.26e-16!52;UBERON:0005068!1.26e-16!52;UBERON:0006241!1.26e-16!52;UBERON:0007135!1.26e-16!52;UBERON:0000955!5.78e-15!50;UBERON:0006238!5.78e-15!50;UBERON:0003056!1.90e-14!49;UBERON:0002616!2.48e-14!49;UBERON:0002020!1.08e-13!34;UBERON:0003080!6.74e-12!40;UBERON:0002780!3.39e-11!39;UBERON:0001890!3.39e-11!39;UBERON:0006240!3.39e-11!39;UBERON:0002791!4.33e-10!29;UBERON:0003528!4.33e-10!29;UBERON:0001893!4.33e-10!29;UBERON:0007811!7.94e-09!86;UBERON:0000153!1.23e-08!94;UBERON:0002420!2.32e-07!8;UBERON:0007245!2.32e-07!8;UBERON:0010009!2.32e-07!8;UBERON:0010011!2.32e-07!8;UBERON:0000454!2.32e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.37e-25,73;UBERON:0000073,1.40e-25,54;UBERON:0001016,1.26e-24,75;UBERON:0001049,4.86e-23,52;UBERON:0005068,4.86e-23,52;UBERON:0006241,4.86e-23,52;UBERON:0007135,4.86e-23,52;UBERON:0002346,4.45e-21,64;UBERON:0003075,4.45e-21,64;UBERON:0007284,4.45e-21,64;UBERON:0004121,1.60e-19,95;UBERON:0000924,1.60e-19,95;UBERON:0006601,1.60e-19,95;UBERON:0002020,2.63e-19,34;UBERON:0010371,2.42e-17,73;UBERON:0000955,1.64e-16,47;UBERON:0006238,1.64e-16,47;UBERON:0002616,1.96e-15,46;UBERON:0003080,4.68e-15,40;UBERON:0002780,8.09e-14,39;UBERON:0001890,8.09e-14,39;UBERON:0006240,8.09e-14,39;UBERON:0002420,1.06e-13,8;UBERON:0007245,1.06e-13,8;UBERON:0010009,1.06e-13,8;UBERON:0010011,1.06e-13,8;UBERON:0000454,1.06e-13,8;UBERON:0003056,1.48e-13,49;UBERON:0003528,1.14e-12,29;UBERON:0002791,1.14e-12,29;UBERON:0001893,1.14e-12,29;UBERON:0010314,6.63e-12,92;UBERON:0002240,3.74e-11,6;UBERON:0005174,3.74e-11,6;UBERON:0001137,3.74e-11,6;UBERON:0001948,1.21e-09,5;UBERON:0002315,1.21e-09,5;UBERON:0003076,5.81e-09,12;UBERON:0003057,5.81e-09,12;UBERON:0000369,8.02e-09,5;UBERON:0002435,8.02e-09,5;UBERON:0000204,8.02e-09,5;UBERON:0010082,8.02e-09,5;UBERON:0002950,3.77e-08,4;UBERON:0001891,3.77e-08,4;UBERON:0009616,3.77e-08,4;UBERON:0010286,3.77e-08,4
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,5.66486090406874,4.7609188134483,4.43681982454325,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.675029691658453,0.210324961351382,9.99778445413313,8.83474163806454,2.57230678351403,1.53352753629178,0,4.40463523997555,2.42605942361857,6.91229399653096,6.3305418110493,5.76372154695181,4.68822033501084,4.18774498502071,12.9435400307286,9.0150966188318,4.41942878210502,8.11518580554887,4.84638559145781,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,7.18995069143149,1.37250180845588,6.78533501409468,2.08589184230732,1.79000820131231,5.81806524766768,6.97637431191358,0,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.753524089178575,0.884474488967262,1.15302348256365,1.40552586839593,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,2.3131894342054,4.93942139420565,0,0,0.639864751605702,0,0.257734922644187,0.201683524623343,0,0.570676878337677,0,0.494096864172033,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,6.56385444916338,0,0,0.315508219416257,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0.876767573733936,0.790575555893047,3.21321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,4.08527526904546,0,0.388076051348264,0.214337035031592,0,0,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,1.6942555278512,0.920650473014354,1.14579102687879,0.859265911718438,2.05524755931193,0.755393897389701,0,1.80128481289688,0,0.51776031175182,0.31136204275253,0.798049746802062,0.682934423016537,1.21553358534147,1.25767897576789,0.919217542250071,1.77797382241292,0.618105171716683,1.28367683836726,0.758091635291392,0.50695859978048,0.377252682772152,1.12369808963859,1.60062881012173,1.09127391015665,1.90517476513229,1.27472758539341,0.77163688185482,0.824171801606613,0.588795680537589,0,0.70990322463735,1.90748951957857,0.726732083161643,1.12931256498397,0.846146078916765,0.914639864363863,1.05227884575137,1.7654534799962,1.68342681497322,0.711810108745045,1.37906275325789,0.818462086339379,0.619747364743864,0.578719832943424,2.99772693525535,0.233931608445408,0.859484216193193,0.382576664137687,1.10295709559758,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,5.66486090406874,4.7609188134483,4.43681982454325,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.675029691658453,0.210324961351382,9.99778445413313,8.83474163806454,2.57230678351403,1.53352753629178,0,4.40463523997555,2.42605942361857,6.91229399653096,6.3305418110493,5.76372154695181,4.68822033501084,4.18774498502071,12.9435400307286,9.0150966188318,4.41942878210502,8.11518580554887,4.84638559145781,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,7.18995069143149,1.37250180845588,6.78533501409468,2.08589184230732,1.79000820131231,5.81806524766768,6.97637431191358,0,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.753524089178575,0.884474488967262,1.15302348256365,1.40552586839593,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,2.3131894342054,4.93942139420565,0,0,0.639864751605702,0,0.257734922644187,0.201683524623343,0,0.570676878337677,0,0.494096864172033,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,6.56385444916338,0,0,0.315508219416257,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0.876767573733936,0.790575555893047,3.21321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,4.08527526904546,0,0.388076051348264,0.214337035031592,0,0,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,1.6942555278512,0.920650473014354,1.14579102687879,0.859265911718438,2.05524755931193,0.755393897389701,0,1.80128481289688,0,0.51776031175182,0.31136204275253,0.798049746802062,0.682934423016537,1.21553358534147,1.25767897576789,0.919217542250071,1.77797382241292,0.618105171716683,1.28367683836726,0.758091635291392,0.50695859978048,0.377252682772152,1.12369808963859,1.60062881012173,1.09127391015665,1.90517476513229,1.27472758539341,0.77163688185482,0.824171801606613,0.588795680537589,0,0.70990322463735,1.90748951957857,0.726732083161643,1.12931256498397,0.846146078916765,0.914639864363863,1.05227884575137,1.7654534799962,1.68342681497322,0.711810108745045,1.37906275325789,0.818462086339379,0.619747364743864,0.578719832943424,2.99772693525535,0.233931608445408,0.859484216193193,0.382576664137687,1.10295709559758,0.231867835620421
|short_description=p2@Zcchc12
|short_description=p2@Zcchc12
}}
}}

Latest revision as of 19:55, 1 October 2015

Short description:p2@Zcchc12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Zcchc12_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: 0bp_to_ENSMUST00000115257_5end
EntrezGene:Zcchc12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Zcchc12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.35e-2423
neuroblast (sensu Vertebrata)2.35e-2423
neuron8.48e-1733
neuronal stem cell8.48e-1733
neuroblast8.48e-1733
electrically signaling cell8.48e-1733
electrically responsive cell2.52e-1339
electrically active cell2.52e-1339
neural cell1.46e-1143
ectodermal cell3.57e-1144
neurectodermal cell3.57e-1144

Uber anatomy
Ontology termp-valuen
central nervous system1.37e-2573
regional part of nervous system1.40e-2554
nervous system1.26e-2475
neural tube4.86e-2352
neural rod4.86e-2352
future spinal cord4.86e-2352
neural keel4.86e-2352
neurectoderm4.45e-2164
neural plate4.45e-2164
presumptive neural plate4.45e-2164
ectoderm-derived structure1.60e-1995
ectoderm1.60e-1995
presumptive ectoderm1.60e-1995
gray matter2.63e-1934
ecto-epithelium2.42e-1773
brain1.64e-1647
future brain1.64e-1647
regional part of brain1.96e-1546
anterior neural tube4.68e-1540
regional part of forebrain8.09e-1439
forebrain8.09e-1439
future forebrain8.09e-1439
basal ganglion1.06e-138
nuclear complex of neuraxis1.06e-138
aggregate regional part of brain1.06e-138
collection of basal ganglia1.06e-138
cerebral subcortex1.06e-138
pre-chordal neural plate1.48e-1349
brain grey matter1.14e-1229
regional part of telencephalon1.14e-1229
telencephalon1.14e-1229
structure with developmental contribution from neural crest6.63e-1292
spinal cord3.74e-116
dorsal region element3.74e-116
dorsum3.74e-116
regional part of spinal cord1.21e-095
gray matter of spinal cord1.21e-095
posterior neural tube5.81e-0912
chordal neural plate5.81e-0912
corpus striatum8.02e-095
striatum8.02e-095
ventral part of telencephalon8.02e-095
future corpus striatum8.02e-095
regional part of midbrain3.77e-084
midbrain3.77e-084
presumptive midbrain3.77e-084
midbrain neural tube3.77e-084
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