FFCP PHASE1:Hg19::chr17:42733803..42733843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284071 | |EntrezGene=284071 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26670 | |HGNC=26670 | ||
|TSSclassifier=strong | |||
|UniProt=A2RUB1 | |UniProt=A2RUB1 | ||
|association_with_transcript=0bp_to_ENST00000409122_5end | |association_with_transcript=0bp_to_ENST00000409122_5end | ||
|cluster_id=chr17:42733803..42733843,+ | |||
|coexpression_cluster_id=C3639 | |||
|description=CAGE_peak_1_at_C17orf104_5end | |description=CAGE_peak_1_at_C17orf104_5end | ||
|id=chr17:42733803..42733843,+ | |id=chr17:42733803..42733843,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.34e-12!7;CL:0000586!6.34e-12!7;CL:0002322!8.07e-09!5;CL:1000449!6.66e-08!16;CL:0000066!7.72e-08!254;CL:1000507!2.28e-07!12;CL:1000494!2.28e-07!12;CL:1000497!8.74e-07!18;CL:0002518!8.74e-07!18 | |ontology_enrichment_celltype=CL:0000039!6.34e-12!7;CL:0000586!6.34e-12!7;CL:0002322!8.07e-09!5;CL:1000449!6.66e-08!16;CL:0000066!7.72e-08!254;CL:1000507!2.28e-07!12;CL:1000494!2.28e-07!12;CL:1000497!8.74e-07!18;CL:0002518!8.74e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.23e-14;5!CL:0000039;3.19e-11;7!CL:0000586;3.19e-11;7!CL:1000507;4.17e-09;10!CL:1000494;4.17e-09;10!CL:0000239;1.24e-08;3!CL:1000615;1.24e-08;3!CL:0002306;1.24e-08;3!CL:0002535;1.52e-07;2!CL:0000082;5.70e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.68e-14,5;CL:0000039,4.07e-11,7;CL:0000586,4.07e-11,7;CL:1000507,5.20e-09,10;CL:1000494,5.20e-09,10;CL:0000239,1.48e-08,3;CL:1000615,1.48e-08,3;CL:0002306,1.48e-08,3;CL:0000066,1.22e-07,253;CL:0002535,1.52e-07,2;CL:0000082,6.20e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.54e-11;10!UBERON:0005564;4.54e-11;10 | |||
|ontology_enrichment_disease=DOID:0050687!3.28e-13!143;DOID:162!1.35e-11!235;DOID:14566!5.19e-11!239;DOID:305!1.38e-10!106;DOID:0050615!2.10e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1324;4.02e-09;15!DOID:0050615;1.75e-08;16!DOID:3095;1.50e-07;22!DOID:2994;1.50e-07;22!DOID:1325;2.13e-07;7!DOID:3904;2.13e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.40e-13,106;DOID:0050687,7.25e-13,143;DOID:162,6.85e-10,235;DOID:14566,1.72e-09,239;DOID:1324,4.49e-09,15;DOID:0050615,1.94e-08,16;DOID:3095,1.58e-07,22;DOID:2994,1.58e-07,22;DOID:1325,2.26e-07,7;DOID:3904,2.26e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002113!4.64e-11!27;UBERON:0003918!4.64e-11!27;UBERON:0005095!4.64e-11!27;UBERON:0007687!4.64e-11!27;UBERON:0003886!5.57e-09!63;UBERON:0006555!9.24e-09!17;UBERON:0005103!9.24e-09!17;UBERON:0000083!9.24e-09!17;UBERON:0009201!9.24e-09!17;UBERON:0004819!9.24e-09!17;UBERON:0006553!9.24e-09!17;UBERON:0003074!9.24e-09!17;UBERON:0003060!9.24e-09!17;UBERON:0000489!1.11e-08!32;UBERON:0000464!1.27e-08!104;UBERON:0000473!2.42e-08!8;UBERON:0002553!2.93e-08!70;UBERON:0000080!3.91e-08!18;UBERON:0002120!3.91e-08!18;UBERON:0004875!3.91e-08!18;UBERON:0005721!3.91e-08!18;UBERON:0005754!3.91e-08!18;UBERON:0007297!3.91e-08!18;UBERON:0004211!6.66e-08!16;UBERON:0001285!6.66e-08!16;UBERON:0007684!6.66e-08!16;UBERON:0003220!6.66e-08!16;UBERON:0004208!6.66e-08!16;UBERON:0001851!9.48e-08!16;UBERON:0009773!2.28e-07!12;UBERON:0001231!2.28e-07!12;UBERON:0004810!2.28e-07!12;UBERON:0003135!2.37e-07!11;UBERON:0005177!4.36e-07!107;UBERON:0004876!4.47e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.82e-14;8!UBERON:0003135;5.47e-10;11!UBERON:0004211;4.17e-09;10!UBERON:0009773;4.17e-09;10!UBERON:0001231;4.17e-09;10!UBERON:0004810;4.17e-09;10!UBERON:0006853;1.24e-08;3!UBERON:0007685;1.24e-08;3!UBERON:0004134;1.24e-08;3!UBERON:0002113;8.61e-08;24!UBERON:0011143;8.61e-08;24!UBERON:0001264;1.11e-07;10!UBERON:0006955;1.52e-07;2!UBERON:0004801;1.52e-07;2!UBERON:0000922;2.27e-07;49!UBERON:0004802;5.70e-07;19!UBERON:0000115;5.70e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.25e-14,8;UBERON:0003135,6.57e-10,11;UBERON:0005177,1.91e-09,101;UBERON:0004810,5.20e-09,10;UBERON:0006853,1.48e-08,3;UBERON:0007685,1.48e-08,3;UBERON:0004134,1.48e-08,3;UBERON:0001264,1.09e-07,10;UBERON:0006955,1.52e-07,2;UBERON:0004801,1.52e-07,2;UBERON:0002323,3.69e-07,46;UBERON:0002113,4.82e-07,26;UBERON:0003918,4.82e-07,26;UBERON:0011143,4.82e-07,26;UBERON:0005095,4.82e-07,26;UBERON:0007687,4.82e-07,26;UBERON:0004802,6.20e-07,19;UBERON:0000115,6.20e-07,19 | |||
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| ||
|short_description=p1@C17orf104 | |short_description=p1@C17orf104 | ||
}} | }} |
Latest revision as of 22:14, 24 September 2015
Short description: | p1@C17orf104 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C17orf104_5end |
Coexpression cluster: | C3639_testis_testicular_small_epidermoid_choriocarcinoma_argyrophil_hereditary |
Association with transcript: | 0bp_to_ENST00000409122_5end |
EntrezGene: | C17orf104 |
HGNC: | 26670 |
UniProt: | A2RUB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.68e-14 | 5 |
germ line cell | 4.07e-11 | 7 |
germ cell | 4.07e-11 | 7 |
kidney tubule cell | 5.20e-09 | 10 |
nephron tubule epithelial cell | 5.20e-09 | 10 |
brush border epithelial cell | 1.48e-08 | 3 |
kidney cortex tubule cell | 1.48e-08 | 3 |
epithelial cell of proximal tubule | 1.48e-08 | 3 |
epithelial cell | 1.22e-07 | 253 |
epithelial cell of cervix | 1.52e-07 | 2 |
epithelial cell of lung | 6.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
testis | 6.25e-14 | 8 |
male reproductive organ | 6.57e-10 | 11 |
trunk region element | 1.91e-09 | 101 |
nephron tubule epithelium | 5.20e-09 | 10 |
renal cortex tubule | 1.48e-08 | 3 |
region of nephron tubule | 1.48e-08 | 3 |
proximal tubule | 1.48e-08 | 3 |
pancreas | 1.09e-07 | 10 |
uterine epithelium | 1.52e-07 | 2 |
cervix epithelium | 1.52e-07 | 2 |
body cavity | 3.69e-07 | 46 |
kidney | 4.82e-07 | 26 |
kidney mesenchyme | 4.82e-07 | 26 |
upper urinary tract | 4.82e-07 | 26 |
kidney rudiment | 4.82e-07 | 26 |
kidney field | 4.82e-07 | 26 |
respiratory tract epithelium | 6.20e-07 | 19 |
lung epithelium | 6.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.40e-13 | 106 |
cell type cancer | 7.25e-13 | 143 |
cancer | 6.85e-10 | 235 |
disease of cellular proliferation | 1.72e-09 | 239 |
lung cancer | 4.49e-09 | 15 |
respiratory system cancer | 1.94e-08 | 16 |
germ cell and embryonal cancer | 1.58e-07 | 22 |
germ cell cancer | 1.58e-07 | 22 |
bronchus cancer | 2.26e-07 | 7 |
bronchogenic carcinoma | 2.26e-07 | 7 |