FFCP PHASE1:Hg19::chr10:94050820..94050868,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:94050820..94050868,-
|short_description=p1@CPEB3
|description=CAGE_peak_1_at_CPEB3_5end
|association_with_transcript=0bp_to_ENST00000265997,ENST0000039421...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22849 | |EntrezGene=22849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21746 | |HGNC=21746 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NE35 | |UniProt=Q8NE35 | ||
|association_with_transcript=0bp_to_ENST00000265997,ENST00000394210,uc001khw.1,uc010qnn.1_5end | |||
|cluster_id=chr10:94050820..94050868,- | |||
|coexpression_cluster_id=C1101 | |||
|description=CAGE_peak_1_at_CPEB3_5end | |||
|id=chr10:94050820..94050868,- | |||
|ontology_enrichment_celltype=CL:0000738!3.95e-11!140;CL:0000037!5.21e-11!172;CL:0000566!5.21e-11!172;CL:0002032!2.13e-10!165;CL:0000837!2.13e-10!165;CL:0000988!4.99e-10!182;CL:0000542!3.33e-09!53;CL:0000051!3.33e-09!53;CL:0002031!3.73e-09!124;CL:0000838!3.80e-09!52;CL:0002087!1.11e-08!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.15e-10,136;CL:0000542,7.50e-10,53;CL:0000051,7.50e-10,53;CL:0000838,8.79e-10,52;CL:0000037,1.50e-09,168;CL:0002032,5.16e-09,161;CL:0000837,5.16e-09,161;CL:0000988,1.00e-08,177;CL:0002031,2.03e-08,120;CL:0002087,6.67e-08,115 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.91e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.49e-53!115;UBERON:0001049!5.08e-25!57;UBERON:0005068!5.08e-25!57;UBERON:0006241!5.08e-25!57;UBERON:0007135!5.08e-25!57;UBERON:0003080!1.51e-21!42;UBERON:0002780!5.22e-21!41;UBERON:0001890!5.22e-21!41;UBERON:0006240!5.22e-21!41;UBERON:0000955!2.03e-20!69;UBERON:0006238!2.03e-20!69;UBERON:0002616!2.04e-20!59;UBERON:0001017!1.34e-19!82;UBERON:0005743!8.68e-18!86;UBERON:0002020!3.27e-17!34;UBERON:0003528!3.27e-17!34;UBERON:0001893!4.75e-17!34;UBERON:0002791!1.77e-16!33;UBERON:0001869!3.89e-16!32;UBERON:0000073!4.02e-16!94;UBERON:0001016!4.02e-16!94;UBERON:0002619!2.66e-15!22;UBERON:0002346!3.09e-14!90;UBERON:0001950!4.01e-14!20;UBERON:0003075!4.67e-14!86;UBERON:0007284!4.67e-14!86;UBERON:0000956!5.84e-12!25;UBERON:0000203!5.84e-12!25;UBERON:0003056!4.26e-09!61;UBERON:0000153!1.72e-08!129;UBERON:0007811!1.72e-08!129;UBERON:0000033!2.63e-07!123;UBERON:0002420!7.23e-07!9;UBERON:0007245!7.23e-07!9;UBERON:0010009!7.23e-07!9;UBERON:0010011!7.23e-07!9;UBERON:0000454!7.23e-07!9;UBERON:0002308!7.47e-07!9;UBERON:0000125!7.47e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.66e-18;41!UBERON:0001890;7.66e-18;41!UBERON:0002619;1.53e-17;22!UBERON:0003528;5.23e-17;34!UBERON:0002020;5.23e-17;34!UBERON:0001869;6.87e-17;32!UBERON:0001893;7.42e-17;34!UBERON:0002791;7.87e-17;32!UBERON:0001950;3.71e-16;20!UBERON:0007023;5.05e-16;114!UBERON:0000073;5.94e-16;53!UBERON:0002616;5.94e-16;53!UBERON:0000956;5.95e-14;25!UBERON:0000203;5.95e-14;25!UBERON:0000955;1.34e-10;68!UBERON:0001017;4.74e-10;75!UBERON:0001016;1.48e-08;83!UBERON:0002420;9.73e-08;9!UBERON:0007245;9.73e-08;9!UBERON:0010009;9.73e-08;9!UBERON:0010011;9.73e-08;9!UBERON:0000454;9.73e-08;9!UBERON:0000125;9.88e-08;9!UBERON:0002308;9.88e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.65e-60,114;UBERON:0001049,3.13e-29,56;UBERON:0005068,3.13e-29,56;UBERON:0006241,3.13e-29,56;UBERON:0007135,3.13e-29,56;UBERON:0000073,1.87e-27,53;UBERON:0002616,1.87e-27,53;UBERON:0002780,2.34e-24,41;UBERON:0001890,2.34e-24,41;UBERON:0003080,2.34e-24,41;UBERON:0006240,2.34e-24,41;UBERON:0000955,3.27e-21,68;UBERON:0006238,3.27e-21,68;UBERON:0001017,3.56e-21,81;UBERON:0003528,5.83e-20,34;UBERON:0002020,5.83e-20,34;UBERON:0001893,9.04e-20,34;UBERON:0001869,1.03e-18,32;UBERON:0002791,1.31e-18,32;UBERON:0001016,2.41e-18,89;UBERON:0002346,7.03e-18,86;UBERON:0003075,9.49e-18,82;UBERON:0007284,9.49e-18,82;UBERON:0002619,1.94e-17,22;UBERON:0001950,4.48e-16,20;UBERON:0000956,7.17e-14,25;UBERON:0000203,7.17e-14,25;UBERON:0003056,7.82e-13,61;UBERON:0010371,1.88e-11,104;UBERON:0011216,1.92e-09,223;UBERON:0010314,2.55e-08,132;UBERON:0002420,1.07e-07,9;UBERON:0007245,1.07e-07,9;UBERON:0010009,1.07e-07,9;UBERON:0010011,1.07e-07,9;UBERON:0000454,1.07e-07,9;UBERON:0000125,1.11e-07,9;UBERON:0002308,1.11e-07,9;UBERON:0004121,9.29e-07,171;UBERON:0000924,9.29e-07,171;UBERON:0006601,9.29e-07,171 | |||
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| ||
|short_description=p1@CPEB3 | |||
}} | }} |
Latest revision as of 00:33, 20 September 2015
Short description: | p1@CPEB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPEB3_5end |
Coexpression cluster: | C1101_testis_cerebellum_parietal_medial_occipital_middle_pituitary |
Association with transcript: | 0bp_to_ENST00000265997, ENST00000394210, uc001khw.1, uc010qnn.1_5end |
EntrezGene: | CPEB3 |
HGNC: | 21746 |
UniProt: | Q8NE35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.15e-10 | 136 |
lymphocyte | 7.50e-10 | 53 |
common lymphoid progenitor | 7.50e-10 | 53 |
lymphoid lineage restricted progenitor cell | 8.79e-10 | 52 |
hematopoietic stem cell | 1.50e-09 | 168 |
hematopoietic oligopotent progenitor cell | 5.16e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.16e-09 | 161 |
hematopoietic cell | 1.00e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 2.03e-08 | 120 |
nongranular leukocyte | 6.67e-08 | 115 |