FFCP PHASE1:Hg19::chr10:95241966..95241996,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:95241966..95241996,-
|short_description=p4@MYOF
|description=CAGE_peak_4_at_MYOF_5end
|association_with_transcript=-15bp_to_ENST00000358334,ENST0000035926...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26509 | |EntrezGene=26509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3656 | |HGNC=3656 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZM1 | |UniProt=Q9NZM1 | ||
|association_with_transcript=-15bp_to_ENST00000358334,ENST00000359263,ENST00000371488,ENST00000488645_5end | |||
|cluster_id=chr10:95241966..95241996,- | |||
|coexpression_cluster_id=C2080 | |||
|description=CAGE_peak_4_at_MYOF_5end | |||
|id=chr10:95241966..95241996,- | |||
|ontology_enrichment_celltype=CL:0000222!1.96e-16!119;CL:0000055!4.60e-16!180;CL:0000220!4.54e-14!246;CL:0000057!8.35e-14!75;CL:0002321!1.98e-13!248;CL:0000076!4.57e-13!62;CL:0000213!2.44e-10!57;CL:0000215!2.44e-10!57;CL:0000066!3.41e-09!254;CL:0002620!1.29e-08!23;CL:0002139!2.58e-08!24;CL:0000077!4.19e-07!19;CL:0000680!6.44e-07!57;CL:0000056!6.44e-07!57;CL:0000355!6.44e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.26e-09;23!CL:0002139;2.20e-08;24!CL:0000076;2.66e-07;63!CL:0000077;3.62e-07;19!CL:0000071;9.60e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.94e-17,121;CL:0000057,3.14e-14,76;CL:0000076,9.14e-14,63;CL:0002321,1.24e-13,250;CL:0000213,2.95e-10,58;CL:0000215,2.95e-10,58;CL:0000066,6.86e-09,253;CL:0002620,1.01e-08,23;CL:0002139,2.04e-08,24;CL:0000680,2.72e-07,58;CL:0000056,2.72e-07,58;CL:0000355,2.72e-07,58;CL:0000077,3.46e-07,19;CL:0000071,9.59e-07,18;CL:0002546,9.59e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;9.60e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.24e-17!659;UBERON:0000467!2.63e-14!625;UBERON:0002100!5.08e-14!216;UBERON:0000480!5.42e-14!626;UBERON:0000475!1.50e-13!365;UBERON:0003102!1.49e-11!95;UBERON:0002049!2.52e-11!79;UBERON:0007798!2.52e-11!79;UBERON:0000926!9.07e-11!448;UBERON:0004120!9.07e-11!448;UBERON:0006603!9.07e-11!448;UBERON:0003104!2.67e-10!238;UBERON:0009142!2.67e-10!238;UBERON:0005256!3.41e-10!143;UBERON:0000914!3.11e-09!83;UBERON:0002329!3.11e-09!83;UBERON:0003077!3.11e-09!83;UBERON:0003059!3.11e-09!83;UBERON:0007282!3.11e-09!83;UBERON:0009618!3.11e-09!83;UBERON:0007285!3.11e-09!83;UBERON:0004872!6.57e-09!84;UBERON:0000490!7.53e-09!138;UBERON:0000062!1.60e-08!511;UBERON:0000481!1.64e-08!347;UBERON:0000055!1.68e-08!69;UBERON:0002199!4.39e-08!45;UBERON:0002416!4.39e-08!45;UBERON:0002050!4.89e-08!605;UBERON:0005423!4.89e-08!605;UBERON:0002097!5.85e-08!40;UBERON:0004290!6.58e-08!70;UBERON:0000923!9.36e-08!604;UBERON:0005291!9.36e-08!604;UBERON:0006598!9.36e-08!604;UBERON:0002532!9.36e-08!604;UBERON:0003914!9.93e-08!118;UBERON:0001981!1.50e-07!60;UBERON:0007500!1.50e-07!60;UBERON:0004537!1.50e-07!60;UBERON:0006965!1.50e-07!60;UBERON:0000922!1.92e-07!612;UBERON:0000486!2.78e-07!82;UBERON:0004535!5.32e-07!110;UBERON:0001009!9.07e-07!113;UBERON:0004923!9.34e-07!57;UBERON:0000119!9.79e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.44e-07;41!UBERON:0004638;9.60e-07;18!UBERON:0001986;9.60e-07;18!UBERON:0004852;9.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.11e-12,199;UBERON:0003102,2.17e-12,99;UBERON:0002049,2.40e-11,78;UBERON:0007798,2.40e-11,78;UBERON:0000490,7.76e-11,148;UBERON:0003104,5.28e-10,160;UBERON:0009142,5.28e-10,160;UBERON:0005256,2.94e-09,122;UBERON:0004872,7.68e-09,83;UBERON:0002199,1.32e-08,46;UBERON:0002416,1.32e-08,46;UBERON:0000055,1.57e-08,68;UBERON:0002097,1.72e-08,41;UBERON:0007503,2.41e-08,78;UBERON:0002329,3.57e-08,71;UBERON:0003059,3.57e-08,71;UBERON:0007282,3.57e-08,71;UBERON:0004290,3.57e-08,71;UBERON:0009618,3.57e-08,71;UBERON:0004923,3.97e-08,66;UBERON:0007524,4.13e-08,73;UBERON:0003077,6.83e-08,72;UBERON:0007285,6.83e-08,72;UBERON:0003914,1.42e-07,117;UBERON:0000486,1.48e-07,83;UBERON:0007500,1.60e-07,59;UBERON:0001981,1.60e-07,59;UBERON:0004537,1.60e-07,59;UBERON:0006965,1.60e-07,59;UBERON:0004535,2.70e-07,109;UBERON:0001009,5.83e-07,112;UBERON:0004638,9.59e-07,18;UBERON:0001986,9.59e-07,18;UBERON:0004852,9.59e-07,18 | |||
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| ||
|short_description=p4@MYOF | |||
}} | }} |
Latest revision as of 01:26, 20 September 2015
Short description: | p4@MYOF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYOF_5end |
Coexpression cluster: | C2080_mucinous_Fibroblast_epithelioid_Preadipocyte_Olfactory_prostate_acantholytic |
Association with transcript: | -15bp_to_ENST00000358334, ENST00000359263, ENST00000371488, ENST00000488645_5end |
EntrezGene: | MYOF |
HGNC: | 3656 |
UniProt: | Q9NZM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.94e-17 | 121 |
fibroblast | 3.14e-14 | 76 |
squamous epithelial cell | 9.14e-14 | 63 |
embryonic cell | 1.24e-13 | 250 |
lining cell | 2.95e-10 | 58 |
barrier cell | 2.95e-10 | 58 |
epithelial cell | 6.86e-09 | 253 |
skin fibroblast | 1.01e-08 | 23 |
endothelial cell of vascular tree | 2.04e-08 | 24 |
muscle precursor cell | 2.72e-07 | 58 |
myoblast | 2.72e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.72e-07 | 58 |
mesothelial cell | 3.46e-07 | 19 |
blood vessel endothelial cell | 9.59e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.59e-07 | 18 |