FFCP PHASE1:Hg19::chr10:98592751..98592765,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:98592751..98592765,+
|short_description=p5@LCOR
|description=CAGE_peak_5_at_LCOR_5end
|association_with_transcript=14bp_to_uc001kmt.1_5end
|EntrezGene=84...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84458 | |EntrezGene=84458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29503 | |HGNC=29503 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_uc001kmt.1_5end | |||
|cluster_id=chr10:98592751..98592765,+ | |||
|description=CAGE_peak_5_at_LCOR_5end | |||
|id=chr10:98592751..98592765,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.83e-07!76 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.58e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!5.76e-08!34;UBERON:0001017!7.63e-08!82;UBERON:0002791!1.04e-07!33;UBERON:0001049!1.13e-07!57;UBERON:0005068!1.13e-07!57;UBERON:0006241!1.13e-07!57;UBERON:0007135!1.13e-07!57;UBERON:0003080!1.92e-07!42;UBERON:0002020!2.69e-07!34;UBERON:0003528!2.69e-07!34;UBERON:0001869!3.08e-07!32;UBERON:0005743!3.11e-07!86;UBERON:0002780!3.29e-07!41;UBERON:0001890!3.29e-07!41;UBERON:0006240!3.29e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;7.25e-11;4!UBERON:0000160;3.01e-09;17!UBERON:0005409;4.26e-08;22!UBERON:0002114;6.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.15e-11,4;UBERON:0000160,2.17e-09,17;UBERON:0002114,4.83e-07,2;UBERON:0005409,6.39e-07,25 | |||
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| ||
|short_description=p5@LCOR | |||
}} | }} |
Latest revision as of 05:59, 20 September 2015
Short description: | p5@LCOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCOR_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_uc001kmt.1_5end |
EntrezGene: | LCOR |
HGNC: | 29503 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.58e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.15e-11 | 4 |
intestine | 2.17e-09 | 17 |
duodenum | 4.83e-07 | 2 |
gastrointestinal system | 6.39e-07 | 25 |