FFCP PHASE1:Hg19::chr10:99473409..99473439,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:99473409..99473439,+
|short_description=p2@MARVELD1
|description=CAGE_peak_2_at_MARVELD1_5end
|association_with_transcript=-25bp_to_NM_031484_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83742 | |EntrezGene=83742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28674 | |HGNC=28674 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSK0 | |UniProt=Q9BSK0 | ||
|association_with_transcript=-25bp_to_NM_031484_5end | |||
|cluster_id=chr10:99473409..99473439,+ | |||
|description=CAGE_peak_2_at_MARVELD1_5end | |||
|id=chr10:99473409..99473439,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-20!180;CL:0000057!1.17e-10!75;CL:0000220!6.67e-09!246;CL:0002321!6.75e-09!248;CL:0000548!1.68e-08!679;CL:0000004!1.68e-08!679;CL:0000255!1.68e-08!679;CL:0000012!7.06e-08!682;CL:0000222!9.71e-08!119;CL:0000144!1.09e-07!625;CL:0000183!1.39e-07!59;CL:0002371!5.26e-07!591;CL:0000187!6.25e-07!54;CL:0000680!8.85e-07!57;CL:0000056!8.85e-07!57;CL:0000355!8.85e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.09e-09;19!CL:0000134;5.03e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.67e-10,76;CL:0000349,6.69e-09,19;CL:0000187,2.20e-07,55;CL:0000680,3.63e-07,58;CL:0000056,3.63e-07,58;CL:0000355,3.63e-07,58;CL:0000192,4.16e-07,43;CL:0000514,4.16e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.49e-09!659;UBERON:0003102!5.00e-08!95;UBERON:0000467!1.41e-07!625;UBERON:0000480!1.43e-07!626;UBERON:0002049!4.26e-07!79;UBERON:0007798!4.26e-07!79;UBERON:0004923!4.76e-07!57;UBERON:0000914!7.35e-07!83;UBERON:0002329!7.35e-07!83;UBERON:0003077!7.35e-07!83;UBERON:0003059!7.35e-07!83;UBERON:0007282!7.35e-07!83;UBERON:0009618!7.35e-07!83;UBERON:0007285!7.35e-07!83;UBERON:0000486!7.81e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.03e-07;10!UBERON:0000158;1.03e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.09e-08,14;UBERON:0000158,7.09e-08,14;UBERON:0004923,3.00e-07,66;UBERON:0007503,5.74e-07,78;UBERON:0004872,6.21e-07,83 | |||
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| ||
|short_description=p2@MARVELD1 | |||
}} | }} |
Latest revision as of 06:59, 20 September 2015
Short description: | p2@MARVELD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARVELD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NM_031484_5end |
EntrezGene: | MARVELD1 |
HGNC: | 28674 |
UniProt: | Q9BSK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.67e-10 | 76 |
extraembryonic cell | 6.69e-09 | 19 |
muscle cell | 2.20e-07 | 55 |
muscle precursor cell | 3.63e-07 | 58 |
myoblast | 3.63e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.63e-07 | 58 |
smooth muscle cell | 4.16e-07 | 43 |
smooth muscle myoblast | 4.16e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.09e-08 | 14 |
membranous layer | 7.09e-08 | 14 |
organ component layer | 3.00e-07 | 66 |
epithelial vesicle | 5.74e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 6.21e-07 | 83 |