FFCP PHASE1:Hg19::chr10:99473455..99473561,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:99473455..99473561,+
|short_description=p1@MARVELD1
|description=CAGE_peak_1_at_MARVELD1_5end
|association_with_transcript=0bp_to_ENST00000285605,NM_03148...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83742 | |EntrezGene=83742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28674 | |HGNC=28674 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSK0 | |UniProt=Q9BSK0 | ||
|association_with_transcript=0bp_to_ENST00000285605,NM_031484,uc001koj.3_5end | |||
|cluster_id=chr10:99473455..99473561,+ | |||
|description=CAGE_peak_1_at_MARVELD1_5end | |||
|id=chr10:99473455..99473561,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.83e-32!180;CL:0000222!1.32e-19!119;CL:0000220!7.51e-18!246;CL:0002321!1.09e-17!248;CL:0000183!8.00e-17!59;CL:0000680!4.29e-16!57;CL:0000056!4.29e-16!57;CL:0000355!4.29e-16!57;CL:0002371!1.90e-15!591;CL:0000187!3.16e-15!54;CL:0000144!1.05e-14!625;CL:0000548!2.40e-14!679;CL:0000004!2.40e-14!679;CL:0000255!2.40e-14!679;CL:0000192!5.62e-14!42;CL:0000514!5.62e-14!42;CL:0000012!8.09e-14!682;CL:0000057!1.24e-13!75;CL:0000393!2.03e-12!60;CL:0000211!2.03e-12!60;CL:0000359!3.11e-11!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.15e-10;32!CL:0000192;1.42e-10;43!CL:0000349;1.10e-09;19!CL:0000187;6.29e-09;55!CL:0000134;7.54e-09;55!CL:0000723;6.24e-08;61!CL:0000048;1.75e-07;58!CL:0000393;8.86e-07;61!CL:0000211;8.86e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.48e-20,121;CL:0002321,4.35e-18,250;CL:0000680,1.80e-16,58;CL:0000056,1.80e-16,58;CL:0000355,1.80e-16,58;CL:0000187,1.34e-15,55;CL:0000192,2.41e-14,43;CL:0000514,2.41e-14,43;CL:0000057,7.27e-14,76;CL:0000393,9.10e-13,61;CL:0000211,9.10e-13,61;CL:0000359,2.95e-11,32;CL:0000349,9.34e-10,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.42e-10;43!CL:0000355;5.15e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.70e-19!83;UBERON:0002329!9.70e-19!83;UBERON:0003077!9.70e-19!83;UBERON:0003059!9.70e-19!83;UBERON:0007282!9.70e-19!83;UBERON:0009618!9.70e-19!83;UBERON:0007285!9.70e-19!83;UBERON:0000486!2.22e-18!82;UBERON:0004872!8.72e-18!84;UBERON:0004290!2.10e-17!70;UBERON:0002049!8.23e-17!79;UBERON:0007798!8.23e-17!79;UBERON:0001981!1.53e-15!60;UBERON:0007500!1.53e-15!60;UBERON:0004537!1.53e-15!60;UBERON:0006965!1.53e-15!60;UBERON:0001134!2.60e-15!61;UBERON:0002036!2.60e-15!61;UBERON:0003082!2.60e-15!61;UBERON:0002385!3.03e-15!63;UBERON:0001015!3.03e-15!63;UBERON:0000383!3.03e-15!63;UBERON:0005256!1.14e-14!143;UBERON:0000055!1.98e-14!69;UBERON:0002100!3.10e-14!216;UBERON:0001637!1.16e-13!42;UBERON:0003509!1.16e-13!42;UBERON:0004572!1.16e-13!42;UBERON:0000468!1.91e-12!659;UBERON:0003914!4.04e-12!118;UBERON:0000490!5.47e-12!138;UBERON:0004535!1.72e-11!110;UBERON:0000926!1.85e-11!448;UBERON:0004120!1.85e-11!448;UBERON:0006603!1.85e-11!448;UBERON:0001009!7.45e-11!113;UBERON:0004573!1.09e-10!33;UBERON:0004571!1.09e-10!33;UBERON:0003102!3.96e-10!95;UBERON:0003104!1.03e-09!238;UBERON:0009142!1.03e-09!238;UBERON:0000467!4.85e-09!625;UBERON:0000480!6.46e-09!626;UBERON:0000475!6.84e-09!365;UBERON:0004923!9.37e-09!57;UBERON:0005631!4.24e-08!14;UBERON:0000158!4.24e-08!14;UBERON:0000922!9.10e-08!612;UBERON:0002050!1.15e-07!605;UBERON:0005423!1.15e-07!605;UBERON:0000923!1.80e-07!604;UBERON:0005291!1.80e-07!604;UBERON:0006598!1.80e-07!604;UBERON:0002532!1.80e-07!604;UBERON:0000947!2.25e-07!21;UBERON:0010191!2.25e-07!21;UBERON:0000478!4.13e-07!24;UBERON:0000119!4.28e-07!312;UBERON:0002199!5.07e-07!45;UBERON:0002416!5.07e-07!45;UBERON:0000483!5.84e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.63e-10;42!UBERON:0003509;4.63e-10;42!UBERON:0004572;4.63e-10;42!UBERON:0004573;9.48e-10;33!UBERON:0004571;9.48e-10;33!UBERON:0007500;5.26e-09;56!UBERON:0001981;5.26e-09;56!UBERON:0004537;5.26e-09;56!UBERON:0003914;5.79e-08;74!UBERON:0000947;2.45e-07;21!UBERON:0010191;2.45e-07;21!UBERON:0000055;2.89e-07;65!UBERON:0002049;3.02e-07;75!UBERON:0007798;3.02e-07;75!UBERON:0005631;4.08e-07;10!UBERON:0000158;4.08e-07;10!UBERON:0000478;4.91e-07;24 | |||
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| ||
|short_description=p1@MARVELD1 | |||
}} | }} |
Latest revision as of 07:00, 20 September 2015
Short description: | p1@MARVELD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MARVELD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000285605, NM_031484, uc001koj.3_5end |
EntrezGene: | MARVELD1 |
HGNC: | 28674 |
UniProt: | Q9BSK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.48e-20 | 121 |
embryonic cell | 4.35e-18 | 250 |
muscle precursor cell | 1.80e-16 | 58 |
myoblast | 1.80e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-16 | 58 |
muscle cell | 1.34e-15 | 55 |
smooth muscle cell | 2.41e-14 | 43 |
smooth muscle myoblast | 2.41e-14 | 43 |
fibroblast | 7.27e-14 | 76 |
electrically responsive cell | 9.10e-13 | 61 |
electrically active cell | 9.10e-13 | 61 |
vascular associated smooth muscle cell | 2.95e-11 | 32 |
extraembryonic cell | 9.34e-10 | 19 |