FFCP PHASE1:Hg19::chr12:6715593..6715635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1108 | |EntrezGene=1108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1919 | |HGNC=1919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001qpn.2_5end | |association_with_transcript=0bp_to_uc001qpn.2_5end | ||
|cluster_id=chr12:6715593..6715635,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_CHD4_5end | |description=CAGE_peak_3_at_CHD4_5end | ||
|id=chr12:6715593..6715635,- | |id=chr12:6715593..6715635,- | ||
|ontology_enrichment_celltype=CL:0000219!2.49e-09!390;CL:0002320!5.94e-09!365;CL:0000134!5.06e-08!358;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18;CL:0000034!3.18e-07!444 | |ontology_enrichment_celltype=CL:0000219!2.49e-09!390;CL:0002320!5.94e-09!365;CL:0000134!5.06e-08!358;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18;CL:0000034!3.18e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-07;18!CL:0000789;1.59e-07;18!CL:0002419;1.59e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,3.54e-09,386;CL:0002320,8.05e-09,361;CL:0000134,5.64e-08,354;CL:0000791,1.60e-07,18;CL:0000789,1.60e-07,18;CL:0002420,1.60e-07,18;CL:0002419,1.60e-07,18;CL:0000790,1.60e-07,18;CL:0000034,4.20e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.54e-09!375 | |ontology_enrichment_uberon=UBERON:0002384!3.54e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.98e-09,371 | |||
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| ||
|short_description=p3@CHD4 | |short_description=p3@CHD4 | ||
}} | }} |
Latest revision as of 00:48, 20 September 2015
Short description: | p3@CHD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHD4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_uc001qpn.2_5end |
EntrezGene: | CHD4 |
HGNC: | 1919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 3.54e-09 | 386 |
connective tissue cell | 8.05e-09 | 361 |
mesenchymal cell | 5.64e-08 | 354 |
mature alpha-beta T cell | 1.60e-07 | 18 |
alpha-beta T cell | 1.60e-07 | 18 |
immature T cell | 1.60e-07 | 18 |
mature T cell | 1.60e-07 | 18 |
immature alpha-beta T cell | 1.60e-07 | 18 |
stem cell | 4.20e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.98e-09 | 371 |