FFCP PHASE1:Hg19::chr12:825753..825767,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:825753..825767,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr12:825753..825767,- | |description=CAGE_peak_at_chr12:825753..825767,- | ||
|id=chr12:825753..825767,- | |id=chr12:825753..825767,- | ||
|ontology_enrichment_celltype=CL:0000946!1.01e-07!1;CL:0000786!1.01e-07!1;CL:0000980!1.01e-07!1 | |ontology_enrichment_celltype=CL:0000946!1.01e-07!1;CL:0000786!1.01e-07!1;CL:0000980!1.01e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.78e-26;1!UBERON:0000358;4.61e-26;1!UBERON:0005062;1.18e-25;4!UBERON:0007284;1.18e-25;4 | |||
|ontology_enrichment_disease=DOID:114!2.22e-14!2;DOID:178!5.58e-08!1;DOID:326!5.58e-08!1;DOID:3978!5.58e-08!1;DOID:3394!5.58e-08!1;DOID:5844!5.58e-08!1;DOID:1287!1.31e-07!4 | |ontology_enrichment_disease=DOID:114!2.22e-14!2;DOID:178!5.58e-08!1;DOID:326!5.58e-08!1;DOID:3978!5.58e-08!1;DOID:3394!5.58e-08!1;DOID:5844!5.58e-08!1;DOID:1287!1.31e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:114;2.75e-50;2!DOID:178;8.64e-26;1!DOID:326;8.64e-26;1!DOID:3978;8.64e-26;1!DOID:3394;8.64e-26;1!DOID:5844;8.64e-26;1!DOID:1287;9.22e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.88e-50,2;DOID:178,5.93e-26,1;DOID:326,5.93e-26,1;DOID:3978,5.93e-26,1;DOID:3394,5.93e-26,1;DOID:5844,5.93e-26,1;DOID:1287,7.64e-26,4 | |||
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|short_description=p@chr12:825753..825767,- | |short_description=p@chr12:825753..825767,- | ||
}} | }} |
Latest revision as of 12:58, 24 July 2015
Short description: | p@chr12:825753..825767, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:825753..825767, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.08e-33 | 3 |
cardiac mesenchyme | 1.08e-33 | 3 |
cardial valve | 1.08e-33 | 3 |
tunica intima | 1.08e-33 | 3 |
heart layer | 1.08e-33 | 3 |
endocardium | 1.08e-33 | 3 |
endocardial cushion | 1.08e-33 | 3 |
presumptive endocardium | 1.08e-33 | 3 |
pulmonary valve | 3.58e-26 | 1 |
semi-lunar valve | 3.58e-26 | 1 |
mitral valve | 1.26e-25 | 1 |
primary circulatory organ | 3.31e-23 | 27 |
blood vessel layer | 4.37e-15 | 7 |
atrioventricular valve | 1.55e-13 | 2 |
neural crest-derived structure | 7.30e-11 | 10 |
neural crest | 7.30e-11 | 10 |
neural fold | 7.30e-11 | 10 |
circulatory system | 7.41e-11 | 112 |
heart | 5.40e-10 | 24 |
primitive heart tube | 5.40e-10 | 24 |
primary heart field | 5.40e-10 | 24 |
anterior lateral plate mesoderm | 5.40e-10 | 24 |
heart tube | 5.40e-10 | 24 |
heart primordium | 5.40e-10 | 24 |
cardiac mesoderm | 5.40e-10 | 24 |
cardiogenic plate | 5.40e-10 | 24 |
heart rudiment | 5.40e-10 | 24 |
compound organ | 2.19e-09 | 68 |
adult organism | 6.74e-08 | 114 |
blood | 1.59e-07 | 15 |
haemolymphatic fluid | 1.59e-07 | 15 |
organism substance | 1.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.88e-50 | 2 |
vascular disease | 5.93e-26 | 1 |
ischemia | 5.93e-26 | 1 |
extrinsic cardiomyopathy | 5.93e-26 | 1 |
myocardial ischemia | 5.93e-26 | 1 |
myocardial infarction | 5.93e-26 | 1 |
cardiovascular system disease | 7.64e-26 | 4 |