FFCP PHASE1:Hg19::chr18:34408216..34408219,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:34408216..34408219,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr18:34408216..34408219,+ | |description=CAGE_peak_at_chr18:34408216..34408219,+ | ||
|id=chr18:34408216..34408219,+ | |id=chr18:34408216..34408219,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.70e-11!140;CL:0002087!1.79e-11!119;CL:0002393!5.83e-11!9;CL:0002397!5.83e-11!9;CL:0000037!6.41e-11!172;CL:0000566!6.41e-11!172;CL:0000988!1.04e-09!182;CL:0002320!5.18e-09!365;CL:0000134!5.72e-09!358;CL:0002057!1.13e-08!42;CL:0000048!1.49e-08!430;CL:0000034!2.91e-08!444;CL:0002031!3.26e-08!124;CL:0000723!3.46e-08!436;CL:0002032!3.98e-08!165;CL:0000837!3.98e-08!165;CL:0000860!7.90e-08!45;CL:0000219!1.06e-07!390;CL:0000623!1.70e-07!3;CL:0000825!1.70e-07!3;CL:0000842!4.41e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.70e-11!140;CL:0002087!1.79e-11!119;CL:0002393!5.83e-11!9;CL:0002397!5.83e-11!9;CL:0000037!6.41e-11!172;CL:0000566!6.41e-11!172;CL:0000988!1.04e-09!182;CL:0002320!5.18e-09!365;CL:0000134!5.72e-09!358;CL:0002057!1.13e-08!42;CL:0000048!1.49e-08!430;CL:0000034!2.91e-08!444;CL:0002031!3.26e-08!124;CL:0000723!3.46e-08!436;CL:0002032!3.98e-08!165;CL:0000837!3.98e-08!165;CL:0000860!7.90e-08!45;CL:0000219!1.06e-07!390;CL:0000623!1.70e-07!3;CL:0000825!1.70e-07!3;CL:0000842!4.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.90e-36;6!CL:0002397;4.90e-36;6!CL:0000746;1.19e-18;3!CL:0000737;3.05e-14;4!CL:0000791;5.36e-12;18!CL:0000789;5.36e-12;18!CL:0002419;5.36e-12;18!CL:0000624;1.10e-09;6!CL:0000084;1.04e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.70e-24,9;CL:0002397,3.70e-24,9;CL:0000746,1.14e-18,3;CL:0000513,1.14e-18,3;CL:0000737,2.95e-14,4;CL:0000791,4.84e-12,18;CL:0000789,4.84e-12,18;CL:0002420,4.84e-12,18;CL:0002419,4.84e-12,18;CL:0000790,4.84e-12,18;CL:0002087,2.40e-10,115;CL:0000624,8.48e-10,6;CL:0000084,9.73e-09,25;CL:0000827,9.73e-09,25;CL:0000738,1.41e-08,136;CL:0000037,3.16e-08,168;CL:0002031,5.93e-08,120;CL:0000988,9.67e-08,177;CL:0002032,4.62e-07,161;CL:0000837,4.62e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000513;1.19e-18;3!CL:0000790;5.36e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.47e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr18:34408216..34408219,+ | |short_description=p@chr18:34408216..34408219,+ | ||
}} | }} |
Latest revision as of 00:40, 26 July 2015
Short description: | p@chr18:34408216..34408219, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:34408216..34408219, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.70e-24 | 9 |
CD14-positive, CD16-positive monocyte | 3.70e-24 | 9 |
cardiac muscle cell | 1.14e-18 | 3 |
cardiac muscle myoblast | 1.14e-18 | 3 |
striated muscle cell | 2.95e-14 | 4 |
mature alpha-beta T cell | 4.84e-12 | 18 |
alpha-beta T cell | 4.84e-12 | 18 |
immature T cell | 4.84e-12 | 18 |
mature T cell | 4.84e-12 | 18 |
immature alpha-beta T cell | 4.84e-12 | 18 |
nongranular leukocyte | 2.40e-10 | 115 |
CD4-positive, alpha-beta T cell | 8.48e-10 | 6 |
T cell | 9.73e-09 | 25 |
pro-T cell | 9.73e-09 | 25 |
leukocyte | 1.41e-08 | 136 |
hematopoietic stem cell | 3.16e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 5.93e-08 | 120 |
hematopoietic cell | 9.67e-08 | 177 |
hematopoietic oligopotent progenitor cell | 4.62e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.62e-07 | 161 |