FFCP PHASE1:Hg19::chr12:92860692..92860703,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=237bp_to_uc001tcg.1_5end | |association_with_transcript=237bp_to_uc001tcg.1_5end | ||
|cluster_id=chr12:92860692..92860703,+ | |||
|description=CAGE_peak_4_at_uc001tcg.1_5end | |description=CAGE_peak_4_at_uc001tcg.1_5end | ||
|id=chr12:92860692..92860703,+ | |id=chr12:92860692..92860703,+ | ||
|ontology_enrichment_celltype=CL:0000945!5.50e-42!24;CL:0000826!5.50e-42!24;CL:0000236!6.41e-26!14;CL:0000542!7.17e-19!53;CL:0000051!7.17e-19!53;CL:0000838!4.98e-17!52;CL:0000785!3.13e-08!2;CL:0000955!3.13e-08!2;CL:0000818!3.13e-08!2;CL:0000954!3.13e-08!2;CL:0000816!3.13e-08!2 | |ontology_enrichment_celltype=CL:0000945!5.50e-42!24;CL:0000826!5.50e-42!24;CL:0000236!6.41e-26!14;CL:0000542!7.17e-19!53;CL:0000051!7.17e-19!53;CL:0000838!4.98e-17!52;CL:0000785!3.13e-08!2;CL:0000955!3.13e-08!2;CL:0000818!3.13e-08!2;CL:0000954!3.13e-08!2;CL:0000816!3.13e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.64e-57;24!CL:0000236;6.80e-44;13!CL:0000542;1.26e-19;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.69e-57,24;CL:0000826,1.69e-57,24;CL:0000236,1.42e-40,14;CL:0000542,3.42e-30,53;CL:0000051,3.42e-30,53;CL:0000838,7.33e-26,52;CL:0002087,5.89e-13,115;CL:0000738,1.01e-10,136;CL:0002031,2.65e-10,120;CL:0002032,8.28e-09,161;CL:0000837,8.28e-09,161;CL:0000037,2.25e-08,168;CL:0000988,7.28e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.26e-19;53!UBERON:0006215;1.43e-16;3!UBERON:0010227;1.71e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;7.23e-13;1!DOID:0050177;7.23e-13;1!DOID:12603;7.23e-13;1!DOID:0050427;7.23e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.06e-13,1;DOID:0050177,6.06e-13,1;DOID:0050427,6.06e-13,1;DOID:12603,8.64e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.94e-08!2;UBERON:0003127!7.19e-08!2 | |ontology_enrichment_uberon=UBERON:0000341!1.94e-08!2;UBERON:0003127!7.19e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.71e-13;1!UBERON:0002037;9.44e-09;6!UBERON:0002081;2.22e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.61e-13,1;UBERON:0002037,7.93e-09,6;UBERON:0006215,7.93e-09,6;UBERON:0002081,2.15e-07,2;UBERON:0010227,2.15e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.88831355734875,2.99100968991981,0,0,0,0,0,0,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.18455444504853,2.66852776159066,2.13365111283254,2.80277190925209,1.14950487990897,0.661044872784862,2.86216126360609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.154048617114644,0,0,0,0,0,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.87506075821184,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0.476128862927481,0,0.186224142887574,0,0.0636471582781649,0,0,1.02669990325584,0.26940821205835,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.88831355734875,2.99100968991981,0,0,0,0,0,0,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.18455444504853,2.66852776159066,2.13365111283254,2.80277190925209,1.14950487990897,0.661044872784862,2.86216126360609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.154048617114644,0,0,0,0,0,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.87506075821184,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0.476128862927481,0,0.186224142887574,0,0.0636471582781649,0,0,1.02669990325584,0.26940821205835,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | ||
|short_description=p4@uc001tcg.1 | |short_description=p4@uc001tcg.1 | ||
}} | }} |
Latest revision as of 13:35, 24 July 2015
Short description: | p4@uc001tcg.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc001tcg.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 237bp_to_uc001tcg.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.69e-57 | 24 |
pro-B cell | 1.69e-57 | 24 |
B cell | 1.42e-40 | 14 |
lymphocyte | 3.42e-30 | 53 |
common lymphoid progenitor | 3.42e-30 | 53 |
lymphoid lineage restricted progenitor cell | 7.33e-26 | 52 |
nongranular leukocyte | 5.89e-13 | 115 |
leukocyte | 1.01e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.65e-10 | 120 |
hematopoietic oligopotent progenitor cell | 8.28e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.28e-09 | 161 |
hematopoietic stem cell | 2.25e-08 | 168 |
hematopoietic cell | 7.28e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.61e-13 | 1 |
cerebellum | 7.93e-09 | 6 |
rhombic lip | 7.93e-09 | 6 |
cardiac atrium | 2.15e-07 | 2 |
future cardiac atrium | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.06e-13 | 1 |
monogenic disease | 6.06e-13 | 1 |
xeroderma pigmentosum | 6.06e-13 | 1 |
acute leukemia | 8.64e-13 | 1 |