FFCP PHASE1:Hg19::chr19:1174226..1174287,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22904 | |EntrezGene=22904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29158 | |HGNC=29158 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2G9 | |UniProt=Q9Y2G9 | ||
|association_with_transcript=0bp_to_ENST00000361757,NM_014963,uc002lrk.3,uc010dse.2_5end | |association_with_transcript=0bp_to_ENST00000361757,NM_014963,uc002lrk.3,uc010dse.2_5end | ||
|cluster_id=chr19:1174226..1174287,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_SBNO2_5end | |description=CAGE_peak_1_at_SBNO2_5end | ||
|id=chr19:1174226..1174287,- | |id=chr19:1174226..1174287,- | ||
|ontology_enrichment_celltype=CL:0000766!1.75e-21!76;CL:0000557!2.28e-19!71;CL:0002009!3.91e-18!65;CL:0002194!5.85e-17!63;CL:0000576!5.85e-17!63;CL:0000040!5.85e-17!63;CL:0000559!5.85e-17!63;CL:0000839!1.09e-16!70;CL:0002057!1.15e-16!42;CL:0000738!1.93e-16!140;CL:0000860!4.79e-16!45;CL:0000763!2.24e-15!112;CL:0000049!2.24e-15!112;CL:0000037!2.23e-11!172;CL:0000566!2.23e-11!172;CL:0002031!3.27e-11!124;CL:0002032!6.76e-11!165;CL:0000837!6.76e-11!165;CL:0000988!6.84e-11!182;CL:0002087!7.88e-11!119 | |ontology_enrichment_celltype=CL:0000766!1.75e-21!76;CL:0000557!2.28e-19!71;CL:0002009!3.91e-18!65;CL:0002194!5.85e-17!63;CL:0000576!5.85e-17!63;CL:0000040!5.85e-17!63;CL:0000559!5.85e-17!63;CL:0000839!1.09e-16!70;CL:0002057!1.15e-16!42;CL:0000738!1.93e-16!140;CL:0000860!4.79e-16!45;CL:0000763!2.24e-15!112;CL:0000049!2.24e-15!112;CL:0000037!2.23e-11!172;CL:0000566!2.23e-11!172;CL:0002031!3.27e-11!124;CL:0002032!6.76e-11!165;CL:0000837!6.76e-11!165;CL:0000988!6.84e-11!182;CL:0002087!7.88e-11!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.60e-14;33!CL:0002057;3.60e-14;33!CL:0000473;5.48e-12;39!CL:0000234;5.48e-12;39!CL:0000576;1.54e-11;48!CL:0000766;1.11e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.03e-22,72;CL:0000557,9.61e-20,67;CL:0002009,1.57e-18,61;CL:0002194,2.48e-17,59;CL:0000576,2.48e-17,59;CL:0000040,2.48e-17,59;CL:0000559,2.48e-17,59;CL:0000839,5.64e-17,66;CL:0000860,1.15e-16,42;CL:0002057,1.15e-16,42;CL:0000473,1.52e-16,48;CL:0000234,1.52e-16,48;CL:0000738,2.06e-16,136;CL:0000763,2.10e-15,108;CL:0000049,2.10e-15,108;CL:0000037,2.85e-11,168;CL:0002031,3.72e-11,120;CL:0000988,4.17e-11,177;CL:0002032,8.58e-11,161;CL:0000837,8.58e-11,161;CL:0002087,8.91e-11,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.59e-22!112;UBERON:0002390!1.28e-21!102;UBERON:0003061!1.28e-21!102;UBERON:0002371!2.64e-15!80;UBERON:0002405!1.10e-14!115;UBERON:0001474!9.27e-14!86;UBERON:0003081!1.19e-11!216;UBERON:0004765!3.70e-10!101;UBERON:0001434!3.70e-10!101;UBERON:0003887!4.87e-07!21 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.27e-22,108;UBERON:0002390,8.25e-22,98;UBERON:0003061,8.25e-22,98;UBERON:0002405,3.08e-17,93;UBERON:0002371,1.81e-15,76;UBERON:0001474,7.53e-14,82;UBERON:0004765,1.02e-11,90;UBERON:0001434,7.44e-10,100;UBERON:0003081,4.80e-09,203 | |||
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| ||
|short_description=p1@SBNO2 | |short_description=p1@SBNO2 | ||
}} | }} |
Latest revision as of 06:34, 25 September 2015
Short description: | p1@SBNO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SBNO2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000361757, NM_014963, uc002lrk.3, uc010dse.2_5end |
EntrezGene: | SBNO2 |
HGNC: | 29158 |
UniProt: | Q9Y2G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.03e-22 | 72 |
granulocyte monocyte progenitor cell | 9.61e-20 | 67 |
macrophage dendritic cell progenitor | 1.57e-18 | 61 |
monopoietic cell | 2.48e-17 | 59 |
monocyte | 2.48e-17 | 59 |
monoblast | 2.48e-17 | 59 |
promonocyte | 2.48e-17 | 59 |
myeloid lineage restricted progenitor cell | 5.64e-17 | 66 |
classical monocyte | 1.15e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-16 | 42 |
defensive cell | 1.52e-16 | 48 |
phagocyte | 1.52e-16 | 48 |
leukocyte | 2.06e-16 | 136 |
myeloid cell | 2.10e-15 | 108 |
common myeloid progenitor | 2.10e-15 | 108 |
hematopoietic stem cell | 2.85e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 3.72e-11 | 120 |
hematopoietic cell | 4.17e-11 | 177 |
hematopoietic oligopotent progenitor cell | 8.58e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.58e-11 | 161 |
nongranular leukocyte | 8.91e-11 | 115 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.27e-22 | 108 |
hematopoietic system | 8.25e-22 | 98 |
blood island | 8.25e-22 | 98 |
immune system | 3.08e-17 | 93 |
bone marrow | 1.81e-15 | 76 |
bone element | 7.53e-14 | 82 |
skeletal element | 1.02e-11 | 90 |
skeletal system | 7.44e-10 | 100 |
lateral plate mesoderm | 4.80e-09 | 203 |