FFCP PHASE1:Hg19::chr13:32329330..32329339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:32329330..32329339,- | |||
|description=CAGE_peak_at_chr13:32329330..32329339,- | |description=CAGE_peak_at_chr13:32329330..32329339,- | ||
|id=chr13:32329330..32329339,- | |id=chr13:32329330..32329339,- | ||
|ontology_enrichment_celltype=CL:0000048!1.69e-11!430;CL:0002540!1.74e-11!6;CL:0000723!4.08e-11!436;CL:0000055!6.13e-11!180;CL:0000034!1.27e-10!444;CL:0002092!3.18e-09!10;CL:0000134!6.49e-07!358 | |ontology_enrichment_celltype=CL:0000048!1.69e-11!430;CL:0002540!1.74e-11!6;CL:0000723!4.08e-11!436;CL:0000055!6.13e-11!180;CL:0000034!1.27e-10!444;CL:0002092!3.18e-09!10;CL:0000134!6.49e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002540;1.89e-22;6!CL:0002092;1.43e-13;10!CL:0002582;3.18e-12;3!CL:0000515;3.87e-12;3!CL:0000134;5.41e-11;55!CL:0000048;4.77e-10;58!CL:0000056;2.51e-09;4!CL:0000723;1.69e-08;61!CL:0000034;3.73e-08;69!CL:0002334;8.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.39e-22,6;CL:0002092,1.19e-13,10;CL:0002582,4.72e-12,3;CL:0000515,3.16e-09,4;CL:0002334,8.61e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000515;2.51e-09;4 | |||
|ontology_enrichment_disease=DOID:0060084!5.38e-09!3;DOID:127!5.38e-09!3;DOID:0060072!8.15e-07!4 | |ontology_enrichment_disease=DOID:0060084!5.38e-09!3;DOID:127!5.38e-09!3;DOID:0060072!8.15e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.87e-12;3!DOID:127;3.87e-12;3!DOID:3369;4.86e-10;1!DOID:0060072;2.51e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.54e-12,3;DOID:127,2.54e-12,3;DOID:3369,4.46e-10,1;DOID:0060072,1.84e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;2.42e-11;12!UBERON:0001282;6.58e-10;1!UBERON:0009842;6.58e-10;1!UBERON:0003704;6.58e-10;1!UBERON:0001171;6.58e-10;1!UBERON:0001172;6.58e-10;1!UBERON:0001474;1.30e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,5.79e-10,1;UBERON:0009842,5.79e-10,1;UBERON:0003704,5.79e-10,1;UBERON:0001171,5.79e-10,1;UBERON:0001172,5.79e-10,1 | |||
|phase1_expression=0.908391896352783,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37898272294647,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.538168907066586,0,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0.487185025805993,0,0,0,1.06502877754984,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,3.12022310734098,0.514414748524284,1.41849132023278,0,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,2.46128221334885,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,1.54209693802656,0.710246901252508,1.06765302817952,0,3.02146983995894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.551346289938122,0,0.145016693914229,0.255679882248303,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,2.84855139617503,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,1.63293680054705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0,1.10961172300523,1.32582103692562,1.50940741051545,5.33886732957922,0.457680136793847,0,0,0.147855149989634,0,0,0.155262956876259,0,0,1.5652351854352,0,0,0,0.363697318405119,0,0,1.19428766609585,1.20008329398946,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41998400876678,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62414530760926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.908391896352783,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37898272294647,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.538168907066586,0,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0.487185025805993,0,0,0,1.06502877754984,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,3.12022310734098,0.514414748524284,1.41849132023278,0,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,2.46128221334885,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,1.54209693802656,0.710246901252508,1.06765302817952,0,3.02146983995894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.551346289938122,0,0.145016693914229,0.255679882248303,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,2.84855139617503,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,1.63293680054705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,0,1.10961172300523,1.32582103692562,1.50940741051545,5.33886732957922,0.457680136793847,0,0,0.147855149989634,0,0,0.155262956876259,0,0,1.5652351854352,0,0,0,0.363697318405119,0,0,1.19428766609585,1.20008329398946,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41998400876678,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62414530760926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:32329330..32329339,- | |short_description=p@chr13:32329330..32329339,- | ||
}} | }} |
Latest revision as of 15:37, 24 July 2015
Short description: | p@chr13:32329330..32329339, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:32329330..32329339, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.39e-22 | 6 |
bone marrow cell | 1.19e-13 | 10 |
visceral preadipocyte | 4.72e-12 | 3 |
skeletal muscle myoblast | 3.16e-09 | 4 |
preadipocyte | 8.61e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 5.79e-10 | 1 |
acinus | 5.79e-10 | 1 |
intrahepatic bile duct | 5.79e-10 | 1 |
portal lobule | 5.79e-10 | 1 |
hepatic acinus | 5.79e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.54e-12 | 3 |
leiomyoma | 2.54e-12 | 3 |
peripheral primitive neuroectodermal tumor | 4.46e-10 | 1 |
benign neoplasm | 1.84e-09 | 4 |