FFCP PHASE1:Hg19::chr13:33780118..33780132,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90627 | |EntrezGene=90627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19164 | |HGNC=19164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000399365_5end | |association_with_transcript=10bp_to_ENST00000399365_5end | ||
|cluster_id=chr13:33780118..33780132,- | |||
|coexpression_cluster_id=C2262 | |||
|description=CAGE_peak_7_at_STARD13_5end | |description=CAGE_peak_7_at_STARD13_5end | ||
|id=chr13:33780118..33780132,- | |id=chr13:33780118..33780132,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.62e-16;24!CL:0000946;1.37e-09;1!CL:0000786;1.37e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.27e-16,24;CL:0000826,7.27e-16,24;CL:0000838,3.41e-11,52;CL:0000542,5.88e-11,53;CL:0000051,5.88e-11,53;CL:0000946,1.32e-09,1;CL:0000786,1.32e-09,1;CL:0000980,1.32e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.43e-10;1!DOID:4549;9.43e-10;1!DOID:5861;9.43e-10;1!DOID:6496;9.43e-10;1!DOID:2355;1.76e-09;1!DOID:630;3.53e-09;1!DOID:0050177;3.53e-09;1!DOID:0050427;3.53e-09;1!DOID:171;4.20e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.44e-10,1;DOID:4549,9.44e-10,1;DOID:5861,9.44e-10,1;DOID:6496,9.44e-10,1;DOID:2355,1.99e-09,1;DOID:630,2.35e-09,1;DOID:0050177,2.35e-09,1;DOID:0050427,2.35e-09,1;DOID:171,4.20e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-24!115;UBERON:0002616!1.51e-12!59;UBERON:0002020!9.00e-12!34;UBERON:0003528!9.00e-12!34;UBERON:0001869!1.89e-11!32;UBERON:0002780!3.42e-11!41;UBERON:0001890!3.42e-11!41;UBERON:0006240!3.42e-11!41;UBERON:0002346!7.33e-11!90;UBERON:0001049!8.16e-11!57;UBERON:0005068!8.16e-11!57;UBERON:0006241!8.16e-11!57;UBERON:0007135!8.16e-11!57;UBERON:0003080!8.56e-11!42;UBERON:0002619!9.97e-11!22;UBERON:0001893!1.68e-10!34;UBERON:0000955!1.89e-10!69;UBERON:0006238!1.89e-10!69;UBERON:0001950!2.17e-10!20;UBERON:0000073!3.00e-10!94;UBERON:0001016!3.00e-10!94;UBERON:0001017!8.15e-10!82;UBERON:0005743!1.02e-09!86;UBERON:0002791!1.31e-09!33;UBERON:0000956!4.72e-09!25;UBERON:0000203!4.72e-09!25;UBERON:0003075!3.52e-08!86;UBERON:0007284!3.52e-08!86;UBERON:0000924!1.26e-07!173;UBERON:0006601!1.26e-07!173;UBERON:0000153!3.00e-07!129;UBERON:0007811!3.00e-07!129;UBERON:0001871!6.49e-07!7;UBERON:0000033!7.64e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.29e-24!115;UBERON:0002616!1.51e-12!59;UBERON:0002020!9.00e-12!34;UBERON:0003528!9.00e-12!34;UBERON:0001869!1.89e-11!32;UBERON:0002780!3.42e-11!41;UBERON:0001890!3.42e-11!41;UBERON:0006240!3.42e-11!41;UBERON:0002346!7.33e-11!90;UBERON:0001049!8.16e-11!57;UBERON:0005068!8.16e-11!57;UBERON:0006241!8.16e-11!57;UBERON:0007135!8.16e-11!57;UBERON:0003080!8.56e-11!42;UBERON:0002619!9.97e-11!22;UBERON:0001893!1.68e-10!34;UBERON:0000955!1.89e-10!69;UBERON:0006238!1.89e-10!69;UBERON:0001950!2.17e-10!20;UBERON:0000073!3.00e-10!94;UBERON:0001016!3.00e-10!94;UBERON:0001017!8.15e-10!82;UBERON:0005743!1.02e-09!86;UBERON:0002791!1.31e-09!33;UBERON:0000956!4.72e-09!25;UBERON:0000203!4.72e-09!25;UBERON:0003075!3.52e-08!86;UBERON:0007284!3.52e-08!86;UBERON:0000924!1.26e-07!173;UBERON:0006601!1.26e-07!173;UBERON:0000153!3.00e-07!129;UBERON:0007811!3.00e-07!129;UBERON:0001871!6.49e-07!7;UBERON:0000033!7.64e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.17e-09;4!UBERON:0000923;2.17e-09;4!UBERON:0010316;2.17e-09;4!UBERON:0005291;2.17e-09;4!UBERON:0002050;1.12e-07;5!UBERON:0005423;1.12e-07;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,5.11969818511273,4.51553241974702,5.66717625458491,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,2.88087962239999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,0.25248486685276,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.844016498463076,0,1.15362711958732,0,0.19924798825107,0,0,0,1.84627208191604,0,0,0,0,0.295930216910801,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,2.62444152044929,0,0,0.964771509003264,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,1.61394733071642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,8.73735654245853,0,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.268733889946905,0,0,0,0,0,0,2.2015066337104,0,0.272406812223151,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.628817220398664,0.414239055347196,0,0.592834895693833,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,5.66157390681227,0.109209638192014,0.169732529954025,11.6916206055926,13.1371910114542,0,0,0,0,0.352675943690684,0,0.513833800771676,2.8339315265117,0.319267718114302,0,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0,0,0.405225507710368,0,0,0.570742291745161,0,0,0.992422356778588,0.879356221798103,0,0,0.336283722218824,0,0.227662191351298,0.354809480650555,4.83982747734273,0,0.0679697329768317,0.526182188502793,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,1.16241425368125,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.128915775947154,0.599646935549574,0.178553938605658,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,1.66330178273007,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,1.9234109538194 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,5.11969818511273,4.51553241974702,5.66717625458491,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,2.88087962239999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,0.25248486685276,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.844016498463076,0,1.15362711958732,0,0.19924798825107,0,0,0,1.84627208191604,0,0,0,0,0.295930216910801,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,2.62444152044929,0,0,0.964771509003264,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,1.61394733071642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,8.73735654245853,0,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.268733889946905,0,0,0,0,0,0,2.2015066337104,0,0.272406812223151,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.628817220398664,0.414239055347196,0,0.592834895693833,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,5.66157390681227,0.109209638192014,0.169732529954025,11.6916206055926,13.1371910114542,0,0,0,0,0.352675943690684,0,0.513833800771676,2.8339315265117,0.319267718114302,0,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0,0,0.405225507710368,0,0,0.570742291745161,0,0,0.992422356778588,0.879356221798103,0,0,0.336283722218824,0,0.227662191351298,0.354809480650555,4.83982747734273,0,0.0679697329768317,0.526182188502793,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,1.16241425368125,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.128915775947154,0.599646935549574,0.178553938605658,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,1.66330178273007,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,1.9234109538194 | ||
|short_description=p7@STARD13 | |short_description=p7@STARD13 | ||
}} | }} |
Latest revision as of 04:26, 17 September 2015
Short description: | p7@STARD13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_STARD13_5end |
Coexpression cluster: | C2262_neuroectodermal_extraskeletal_neuroblastoma_B_carcinoid_plasma_choriocarcinoma |
Association with transcript: | 10bp_to_ENST00000399365_5end |
EntrezGene: | STARD13 |
HGNC: | 19164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.27e-16 | 24 |
pro-B cell | 7.27e-16 | 24 |
lymphoid lineage restricted progenitor cell | 3.41e-11 | 52 |
lymphocyte | 5.88e-11 | 53 |
common lymphoid progenitor | 5.88e-11 | 53 |
antibody secreting cell | 1.32e-09 | 1 |
plasma cell | 1.32e-09 | 1 |
plasmablast | 1.32e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.44e-10 | 1 |
extraosseous chondrosarcoma | 9.44e-10 | 1 |
myxoid chondrosarcoma | 9.44e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 9.44e-10 | 1 |
anemia | 1.99e-09 | 1 |
genetic disease | 2.35e-09 | 1 |
monogenic disease | 2.35e-09 | 1 |
xeroderma pigmentosum | 2.35e-09 | 1 |
neuroectodermal tumor | 4.20e-08 | 10 |