FFCP PHASE1:Hg19::chr19:12902289..12902307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3726 | |EntrezGene=3726 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6205 | |HGNC=6205 | ||
|TSSclassifier=strong | |||
|UniProt=P17275,Q5U079 | |UniProt=P17275,Q5U079 | ||
|association_with_transcript=-2bp_to_ENST00000302754,NM_002229,uc002mvc.2_5end | |association_with_transcript=-2bp_to_ENST00000302754,NM_002229,uc002mvc.2_5end | ||
|cluster_id=chr19:12902289..12902307,+ | |||
|coexpression_cluster_id=C427 | |||
|description=CAGE_peak_1_at_JUNB_5end | |description=CAGE_peak_1_at_JUNB_5end | ||
|id=chr19:12902289..12902307,+ | |id=chr19:12902289..12902307,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.36e-33!140;CL:0000766!1.08e-25!76;CL:0002031!1.43e-25!124;CL:0002087!3.35e-24!119;CL:0002057!4.95e-23!42;CL:0000037!2.99e-22!172;CL:0000566!2.99e-22!172;CL:0000557!3.91e-22!71;CL:0000988!1.10e-21!182;CL:0000860!1.92e-21!45;CL:0000839!5.02e-21!70;CL:0002009!2.79e-20!65;CL:0002032!3.40e-20!165;CL:0000837!3.40e-20!165;CL:0002194!2.49e-19!63;CL:0000576!2.49e-19!63;CL:0000040!2.49e-19!63;CL:0000559!2.49e-19!63;CL:0000763!4.17e-15!112;CL:0000049!4.17e-15!112 | |ontology_enrichment_celltype=CL:0000738!8.36e-33!140;CL:0000766!1.08e-25!76;CL:0002031!1.43e-25!124;CL:0002087!3.35e-24!119;CL:0002057!4.95e-23!42;CL:0000037!2.99e-22!172;CL:0000566!2.99e-22!172;CL:0000557!3.91e-22!71;CL:0000988!1.10e-21!182;CL:0000860!1.92e-21!45;CL:0000839!5.02e-21!70;CL:0002009!2.79e-20!65;CL:0002032!3.40e-20!165;CL:0000837!3.40e-20!165;CL:0002194!2.49e-19!63;CL:0000576!2.49e-19!63;CL:0000040!2.49e-19!63;CL:0000559!2.49e-19!63;CL:0000763!4.17e-15!112;CL:0000049!4.17e-15!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-16;33!CL:0002057;2.12e-16;33!CL:0000473;8.60e-15;39!CL:0000234;8.60e-15;39!CL:0000576;7.82e-13;48!CL:0000766;2.62e-12;69!CL:0002087;2.15e-08;104!CL:0000738;2.26e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.27e-33,136;CL:0000766,5.63e-27,72;CL:0002031,2.63e-26,120;CL:0002087,6.25e-25,115;CL:0000473,4.23e-24,48;CL:0000234,4.23e-24,48;CL:0000557,2.56e-23,67;CL:0000860,4.95e-23,42;CL:0002057,4.95e-23,42;CL:0000988,1.02e-22,177;CL:0000037,1.11e-22,168;CL:0000839,3.64e-22,66;CL:0002009,1.80e-21,61;CL:0002032,1.32e-20,161;CL:0000837,1.32e-20,161;CL:0002194,1.68e-20,59;CL:0000576,1.68e-20,59;CL:0000040,1.68e-20,59;CL:0000559,1.68e-20,59;CL:0000763,1.38e-15,108;CL:0000049,1.38e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.41e-27!102;UBERON:0003061!6.41e-27!102;UBERON:0002193!2.77e-24!112;UBERON:0002371!7.82e-21!80;UBERON:0001474!5.71e-19!86;UBERON:0002405!2.33e-15!115;UBERON:0004765!1.79e-14!101;UBERON:0001434!1.79e-14!101;UBERON:0000178!2.58e-07!15;UBERON:0000179!2.58e-07!15;UBERON:0000463!2.58e-07!15;UBERON:0003081!5.46e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.58e-07;15!UBERON:0000179;2.58e-07;15!UBERON:0000463;2.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.90e-28,98;UBERON:0003061,6.90e-28,98;UBERON:0002193,4.55e-25,108;UBERON:0002371,8.28e-22,76;UBERON:0001474,8.71e-20,82;UBERON:0004765,8.71e-20,90;UBERON:0002405,4.11e-19,93;UBERON:0001434,1.19e-15,100;UBERON:0000178,2.58e-07,15;UBERON:0000179,2.58e-07,15;UBERON:0000463,2.58e-07,15;UBERON:0003081,3.77e-07,203 | |||
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| ||
|short_description=p1@JUNB | |short_description=p1@JUNB | ||
}} | }} |
Latest revision as of 21:01, 15 September 2015
Short description: | p1@JUNB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JUNB_5end |
Coexpression cluster: | C427_Eosinophils_CD4_Peripheral_Neutrophils_Basophils_mature_Mast |
Association with transcript: | -2bp_to_ENST00000302754, NM_002229, uc002mvc.2_5end |
EntrezGene: | JUNB |
HGNC: | 6205 |
UniProt: | P17275Q5U079 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.27e-33 | 136 |
myeloid leukocyte | 5.63e-27 | 72 |
hematopoietic lineage restricted progenitor cell | 2.63e-26 | 120 |
nongranular leukocyte | 6.25e-25 | 115 |
defensive cell | 4.23e-24 | 48 |
phagocyte | 4.23e-24 | 48 |
granulocyte monocyte progenitor cell | 2.56e-23 | 67 |
classical monocyte | 4.95e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.95e-23 | 42 |
hematopoietic cell | 1.02e-22 | 177 |
hematopoietic stem cell | 1.11e-22 | 168 |
myeloid lineage restricted progenitor cell | 3.64e-22 | 66 |
macrophage dendritic cell progenitor | 1.80e-21 | 61 |
hematopoietic oligopotent progenitor cell | 1.32e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-20 | 161 |
monopoietic cell | 1.68e-20 | 59 |
monocyte | 1.68e-20 | 59 |
monoblast | 1.68e-20 | 59 |
promonocyte | 1.68e-20 | 59 |
myeloid cell | 1.38e-15 | 108 |
common myeloid progenitor | 1.38e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.90e-28 | 98 |
blood island | 6.90e-28 | 98 |
hemolymphoid system | 4.55e-25 | 108 |
bone marrow | 8.28e-22 | 76 |
bone element | 8.71e-20 | 82 |
skeletal element | 8.71e-20 | 90 |
immune system | 4.11e-19 | 93 |
skeletal system | 1.19e-15 | 100 |
blood | 2.58e-07 | 15 |
haemolymphatic fluid | 2.58e-07 | 15 |
organism substance | 2.58e-07 | 15 |
lateral plate mesoderm | 3.77e-07 | 203 |