FFCP PHASE1:Hg19::chr13:40177342..40177361,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10186 | |EntrezGene=10186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6586 | |HGNC=6586 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y693 | |UniProt=Q9Y693 | ||
|association_with_transcript=0bp_to_NM_005780,uc001uxf.2_5end | |association_with_transcript=0bp_to_NM_005780,uc001uxf.2_5end | ||
|cluster_id=chr13:40177342..40177361,- | |||
|coexpression_cluster_id=C3371 | |||
|description=CAGE_peak_2_at_LHFP_5end | |description=CAGE_peak_2_at_LHFP_5end | ||
|id=chr13:40177342..40177361,- | |id=chr13:40177342..40177361,- | ||
|ontology_enrichment_celltype=CL:0000057!2.17e-10!75;CL:0000055!2.83e-10!180 | |ontology_enrichment_celltype=CL:0000057!2.17e-10!75;CL:0000055!2.83e-10!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.61e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.71e-10,76;CL:0000136,4.67e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.89e-13!659;UBERON:0000475!5.71e-13!365;UBERON:0000924!9.25e-13!173;UBERON:0006601!9.25e-13!173;UBERON:0004121!3.40e-12!169;UBERON:0007023!2.27e-11!115;UBERON:0000467!2.36e-10!625;UBERON:0000480!3.30e-10!626;UBERON:0004923!2.29e-09!57;UBERON:0002616!2.40e-09!59;UBERON:0000073!2.55e-09!94;UBERON:0001016!2.55e-09!94;UBERON:0000119!3.41e-09!312;UBERON:0005743!3.82e-09!86;UBERON:0001017!6.23e-09!82;UBERON:0002346!1.28e-08!90;UBERON:0000064!1.37e-08!219;UBERON:0000483!2.03e-08!309;UBERON:0000955!3.28e-08!69;UBERON:0006238!3.28e-08!69;UBERON:0001049!3.31e-08!57;UBERON:0005068!3.31e-08!57;UBERON:0006241!3.31e-08!57;UBERON:0007135!3.31e-08!57;UBERON:0003075!4.27e-08!86;UBERON:0007284!4.27e-08!86;UBERON:0000033!4.59e-08!123;UBERON:0000153!1.25e-07!129;UBERON:0007811!1.25e-07!129;UBERON:0000481!2.66e-07!347;UBERON:0000477!6.48e-07!286 | |ontology_enrichment_uberon=UBERON:0000468!1.89e-13!659;UBERON:0000475!5.71e-13!365;UBERON:0000924!9.25e-13!173;UBERON:0006601!9.25e-13!173;UBERON:0004121!3.40e-12!169;UBERON:0007023!2.27e-11!115;UBERON:0000467!2.36e-10!625;UBERON:0000480!3.30e-10!626;UBERON:0004923!2.29e-09!57;UBERON:0002616!2.40e-09!59;UBERON:0000073!2.55e-09!94;UBERON:0001016!2.55e-09!94;UBERON:0000119!3.41e-09!312;UBERON:0005743!3.82e-09!86;UBERON:0001017!6.23e-09!82;UBERON:0002346!1.28e-08!90;UBERON:0000064!1.37e-08!219;UBERON:0000483!2.03e-08!309;UBERON:0000955!3.28e-08!69;UBERON:0006238!3.28e-08!69;UBERON:0001049!3.31e-08!57;UBERON:0005068!3.31e-08!57;UBERON:0006241!3.31e-08!57;UBERON:0007135!3.31e-08!57;UBERON:0003075!4.27e-08!86;UBERON:0007284!4.27e-08!86;UBERON:0000033!4.59e-08!123;UBERON:0000153!1.25e-07!129;UBERON:0007811!1.25e-07!129;UBERON:0000481!2.66e-07!347;UBERON:0000477!6.48e-07!286 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-11,114;UBERON:0004121,7.44e-11,171;UBERON:0000924,7.44e-11,171;UBERON:0006601,7.44e-11,171;UBERON:0010314,1.31e-10,132;UBERON:0004923,1.54e-10,66;UBERON:0001016,1.37e-07,89;UBERON:0002346,2.32e-07,86;UBERON:0000119,2.34e-07,309;UBERON:0010371,2.36e-07,104;UBERON:0001049,2.43e-07,56;UBERON:0005068,2.43e-07,56;UBERON:0006241,2.43e-07,56;UBERON:0007135,2.43e-07,56;UBERON:0001017,3.36e-07,81;UBERON:0003075,5.57e-07,82;UBERON:0007284,5.57e-07,82;UBERON:0000955,8.77e-07,68;UBERON:0006238,8.77e-07,68 | |||
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| ||
|short_description=p2@LHFP | |short_description=p2@LHFP | ||
}} | }} |
Latest revision as of 07:53, 17 September 2015
Short description: | p2@LHFP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LHFP_5end |
Coexpression cluster: | C3371_normal_left_heart_lung_diaphragm_aorta_tenocyte |
Association with transcript: | 0bp_to_NM_005780, uc001uxf.2_5end |
EntrezGene: | LHFP |
HGNC: | 6586 |
UniProt: | Q9Y693 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.71e-10 | 76 |
fat cell | 4.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.77e-11 | 114 |
ectoderm-derived structure | 7.44e-11 | 171 |
ectoderm | 7.44e-11 | 171 |
presumptive ectoderm | 7.44e-11 | 171 |
structure with developmental contribution from neural crest | 1.31e-10 | 132 |
organ component layer | 1.54e-10 | 66 |
nervous system | 1.37e-07 | 89 |
neurectoderm | 2.32e-07 | 86 |
cell layer | 2.34e-07 | 309 |
ecto-epithelium | 2.36e-07 | 104 |
neural tube | 2.43e-07 | 56 |
neural rod | 2.43e-07 | 56 |
future spinal cord | 2.43e-07 | 56 |
neural keel | 2.43e-07 | 56 |
central nervous system | 3.36e-07 | 81 |
neural plate | 5.57e-07 | 82 |
presumptive neural plate | 5.57e-07 | 82 |
brain | 8.77e-07 | 68 |
future brain | 8.77e-07 | 68 |