FFCP PHASE1:Hg19::chr19:17007740..17007766,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27151 | |EntrezGene=27151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23228 | |HGNC=23228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_uc010xpj.1_5end | |association_with_transcript=17bp_to_uc010xpj.1_5end | ||
|cluster_id=chr19:17007740..17007766,- | |||
|description=CAGE_peak_1_at_CPAMD8_5end | |description=CAGE_peak_1_at_CPAMD8_5end | ||
|id=chr19:17007740..17007766,- | |id=chr19:17007740..17007766,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.05e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.77e-25!115;UBERON:0000468!1.42e-08!659;UBERON:0000467!3.32e-07!625;UBERON:0000480!4.80e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.54e-19,114;UBERON:0003887,1.02e-09,12;UBERON:0000080,1.24e-08,9;UBERON:0002120,1.24e-08,9;UBERON:0004875,1.24e-08,9;UBERON:0005721,1.24e-08,9;UBERON:0005754,1.24e-08,9;UBERON:0007297,1.24e-08,9;UBERON:0004876,2.57e-08,11;UBERON:0005103,2.18e-07,8;UBERON:0000083,2.18e-07,8;UBERON:0009201,2.18e-07,8;UBERON:0006553,2.18e-07,8;UBERON:0003074,2.18e-07,8;UBERON:0003060,2.18e-07,8;UBERON:0003081,2.44e-07,203 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,0,0,0,0,0,0,0.737201809504527,0,0.218441372130172,1.31883489114227,0.618831764800233,0.331397375727916,0.672325146451775,0,0,0,0.738726348460727,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.464448369948228,0.919421224478927,0.6024118375565,1.47901604066715,0.92960640696362,0.142169232487422,0,0,0.601633342410425,0.217010870715852,4.03047853631864,3.56283032620878,6.95454032612304,0.290796477559129,1.13362783106643,1.21292030593908,0.464858073811369,1.6446715520873,0.309706370895104,0,1.0246428261164,0.47296445977717,0,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0.639337125799041,2.30895910130701,1.99463657621632,0.426224750532694,1.16083695451434,1.13477044938228,0,0,1.0429658368404,0.217188844705117,0,0.368277635987565,0.316462387440884,1.05627643155971,0.850417199860174,0.838634582033504,2.02191536063691,1.80212271409808,1.12507910687956,1.14005097496499,0.59675003159727,0.730656615058536,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.501559486172034,0.32592226663359,0,0,1.11410456885174,0,0,0,0.25618263945135,0.130059347559878,0.657751618414705,1.93445012450094,0.869409257205157,0,0,0,1.58633079776593,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,2.43806866313962,0,0.639312809217652,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,2.35762335895883,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0.596287222100115,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,1.06729878806013,3.01248551488203,4.02829317109147,2.28081631715554,5.6134273236079,0,0,0.446498641420399,0.898117490504679,0.337834441449967,0,0,1.46561395144326,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0.860509862246441,0,0.560677600142307,0,1.48000529050296,0,0.269421344139376,0.326923806226917,1.66493170409425,2.30470369792,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0.61417158655884,0.929932030581889,1.18800285728205,0,0.910161361938026,1.43723628363248,0.336672227908132,0.250237039743928,0.277064115484183,0,0.612975591598039,0.300476117813194,0.567160915800105,0.179389635688862,0.427114777637135,0.847727604638247,1.20036438433761,1.44273540933814,1.54584324027377,1.48893485065272,0.168776332241266,0.487185025805993,1.00973509697646,0.828449087780694,1.13152239773168,0,0.10075209822764,0,0,0.545492241181669,0.573609190778008,0.121973706129595,0.530119073285941,1.2781333715647,0.725627385107593,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,1.4763109092493,2.80483547606892,1.2347220339942,1.47008711385542,0,0,1.18157981336281,0,0,0,0.439001141634502,1.1240175325762,0,0.462942225792648,0.325808305310325,0,1.44331342025273,0,0.234817388471643,1.44366447761074,1.38895653772983,1.33177906564219,3.95102198979638,5.15091697256924,1.23108503043699,0.234004265139238,0.891786973732369,0.93733833986777,0.839910640994298,0.567100388969546,0.447792613514241,0.290633938513962,0.766765358330422,0.985326475791887,2.81754988842323,2.90259361757081,3.60299883542404,3.53478813593864,0.253991577168676,0,0,0,0,0,0.285826432630578,0.112131084345361,0.43596006883328,0.07333828582095,0.517086863031111,0,0.845302752556,0.531876233169741,0,0,0,0,1.28680194292333,0,0,0,1.42156779497018,0,0.301439377059586,1.74306691720059,0.499864955910285,0,1.50677127429638,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0.394061520403854,0.431255149719035,0.385029108839245,0.508189248444927,0,0,0,0,0.749007023947182,0,0,0.36807447515742,0.500170521059677,0,0.831883446123229,0.892144943985809,0.788512075169673,0.702848489956279,0,0,1.03473071292505,0,0.184369168541703,0.781952530212746,6.06983588134496,1.71571711905428,0.82707210449155,0.215714200818617,0.640365346820666,0,0,1.5119514666484,0.744323423456331,0.767309866440312,0.561320188866147,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0.262248829918848,0.451199612907412,0.385076685522074,0,0,0.73886140225013,3.4120015221269,1.70093705276516,1.0795795805107,6.16909010761157,1.89662506280697,3.01013864312912,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.966782203814463,0.870100163485371,0.170453254832202,0.356128142586949,0.991709492165869,0.384380134730212,1.27612712494584,0.809262246844399,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0.38126038784765,0.511795582622668,0.42793898803392,0.318203247925937,0,0.899362287916574,0,0.235624804691373,0,0,0,0,0,0,0.818999468447914,0.707027159768564,0,1.10273068709225,0,0,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0.211107635297664,0.329294892959902,0,1.04980416073495,0.288666338176536,0,1.08890984861323,0.659006605437454,0.43050537267123,0,1.33029046061003,2.29723400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| ||
|short_description=p1@CPAMD8 | |short_description=p1@CPAMD8 | ||
}} | }} |
Latest revision as of 10:45, 16 September 2015
Short description: | p1@CPAMD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPAMD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_uc010xpj.1_5end |
EntrezGene: | CPAMD8 |
HGNC: | 23228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.05e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.54e-19 | 114 |
intraembryonic coelom | 1.02e-09 | 12 |
mesonephros | 1.24e-08 | 9 |
pronephros | 1.24e-08 | 9 |
nephrogenic cord | 1.24e-08 | 9 |
pronephric mesoderm | 1.24e-08 | 9 |
rostral part of nephrogenic cord | 1.24e-08 | 9 |
presumptive pronephric mesoderm | 1.24e-08 | 9 |
urogenital ridge | 2.57e-08 | 11 |
mesonephric epithelium | 2.18e-07 | 8 |
mesonephric tubule | 2.18e-07 | 8 |
nephric duct | 2.18e-07 | 8 |
renal duct | 2.18e-07 | 8 |
mesonephric duct | 2.18e-07 | 8 |
pronephric duct | 2.18e-07 | 8 |
lateral plate mesoderm | 2.44e-07 | 203 |