FFCP PHASE1:Hg19::chr11:12108136..12108151,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:12108136..12108151,+
|short_description=p4@ENST00000527997
|description=CAGE_peak_4_at_ENST00000527997_5end
|association_with_transcript=-286bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-286bp_to_ENST00000527997_5end | |||
|cluster_id=chr11:12108136..12108151,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_4_at_ENST00000527997_5end | |||
|id=chr11:12108136..12108151,+ | |||
|ontology_enrichment_celltype=CL:0000359!4.47e-11!32;CL:0002076!1.67e-08!43;CL:0000192!3.29e-08!42;CL:0000514!3.29e-08!42;CL:0002371!4.57e-08!591;CL:0000220!8.04e-08!246;CL:0002321!1.21e-07!248;CL:0000223!5.80e-07!59;CL:0000548!7.86e-07!679;CL:0000004!7.86e-07!679;CL:0000255!7.86e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.98e-11;32!CL:0002594;2.13e-11;4!CL:0000192;1.12e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.15e-11,32;CL:0002594,2.37e-11,4;CL:0000192,2.24e-08,43;CL:0000514,2.24e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.49e-08!79;UBERON:0007798!2.49e-08!79;UBERON:0001637!2.94e-08!42;UBERON:0003509!2.94e-08!42;UBERON:0004572!2.94e-08!42;UBERON:0003914!5.55e-08!118;UBERON:0000490!1.09e-07!138;UBERON:0001981!2.28e-07!60;UBERON:0007500!2.28e-07!60;UBERON:0004537!2.28e-07!60;UBERON:0006965!2.28e-07!60;UBERON:0004872!3.05e-07!84;UBERON:0000119!3.44e-07!312;UBERON:0000475!9.62e-07!365;UBERON:0004535!9.90e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;2.13e-11;4!UBERON:0007500;3.93e-08;56!UBERON:0001981;3.93e-08;56!UBERON:0004537;3.93e-08;56!UBERON:0001637;8.27e-08;42!UBERON:0003509;8.27e-08;42!UBERON:0004572;8.27e-08;42!UBERON:0004573;1.32e-07;33!UBERON:0004571;1.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.28e-11,42;UBERON:0003509,1.28e-11,42;UBERON:0004572,1.28e-11,42;UBERON:0001310,2.37e-11,4;UBERON:0007500,1.72e-10,59;UBERON:0001981,1.72e-10,59;UBERON:0004537,1.72e-10,59;UBERON:0006965,1.72e-10,59;UBERON:0000055,5.60e-09,68;UBERON:0004573,6.27e-08,33;UBERON:0004571,6.27e-08,33;UBERON:0002049,1.05e-07,78;UBERON:0007798,1.05e-07,78;UBERON:0004872,3.48e-07,83 | |||
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| ||
|short_description=p4@ENST00000527997 | |||
}} | }} |
Latest revision as of 19:10, 23 July 2015
Short description: | p4@ENST00000527997 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000527997_5end |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | -286bp_to_ENST00000527997_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.15e-11 | 32 |
smooth muscle cell of the umbilical artery | 2.37e-11 | 4 |
smooth muscle cell | 2.24e-08 | 43 |
smooth muscle myoblast | 2.24e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
artery | 1.28e-11 | 42 |
arterial blood vessel | 1.28e-11 | 42 |
arterial system | 1.28e-11 | 42 |
umbilical artery | 2.37e-11 | 4 |
epithelial tube open at both ends | 1.72e-10 | 59 |
blood vessel | 1.72e-10 | 59 |
blood vasculature | 1.72e-10 | 59 |
vascular cord | 1.72e-10 | 59 |
vessel | 5.60e-09 | 68 |
systemic artery | 6.27e-08 | 33 |
systemic arterial system | 6.27e-08 | 33 |
vasculature | 1.05e-07 | 78 |
vascular system | 1.05e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 3.48e-07 | 83 |