FFCP PHASE1:Hg19::chr13:76416984..76416995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:76416984..76416995,+ | |||
|description=CAGE_peak_at_chr13:76416984..76416995,+ | |description=CAGE_peak_at_chr13:76416984..76416995,+ | ||
|id=chr13:76416984..76416995,+ | |id=chr13:76416984..76416995,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.06e-14!75;CL:0000055!9.22e-11!180;CL:0002620!1.90e-10!23;CL:0002334!9.29e-08!12 | |ontology_enrichment_celltype=CL:0000057!1.06e-14!75;CL:0000055!9.22e-11!180;CL:0002620!1.90e-10!23;CL:0002334!9.29e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002580;3.60e-16;3!CL:0002620;1.15e-12;23!CL:0002617;3.24e-11;2!CL:0002334;1.58e-10;12!CL:0002579;9.46e-08;3!CL:0002615;2.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.55e-16,3;CL:0002620,9.87e-13,23;CL:0000057,1.24e-11,76;CL:0002617,5.00e-11,2;CL:0002334,1.01e-10,12;CL:0002579,5.64e-08,3;CL:0000136,6.83e-08,15;CL:0000134,1.61e-07,354;CL:0002615,2.35e-07,3;CL:0002320,3.04e-07,361;CL:0000048,5.03e-07,427;CL:0000723,7.93e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.59e-09;5!DOID:450;1.59e-09;5!DOID:66;1.59e-09;5!DOID:423;1.59e-09;5!DOID:0080000;1.59e-09;5!DOID:11722;1.59e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.99e-09,5;DOID:450,1.99e-09,5;DOID:66,1.99e-09,5;DOID:423,1.99e-09,5;DOID:0080000,1.99e-09,5;DOID:11722,1.99e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002367!3.45e-07!11;UBERON:0010147!3.45e-07!11;UBERON:0009846!3.45e-07!11;UBERON:0003353!3.45e-07!11;UBERON:0004902!3.45e-07!11;UBERON:0003820!3.45e-07!11;UBERON:0009847!3.45e-07!11 | |ontology_enrichment_uberon=UBERON:0002367!3.45e-07!11;UBERON:0010147!3.45e-07!11;UBERON:0009846!3.45e-07!11;UBERON:0003353!3.45e-07!11;UBERON:0004902!3.45e-07!11;UBERON:0003820!3.45e-07!11;UBERON:0009847!3.45e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.74e-13;6!UBERON:0002358;1.74e-13;6!UBERON:0003684;1.74e-13;6!UBERON:0001178;1.74e-13;6!UBERON:0000310;1.09e-12;10!UBERON:0001443;1.64e-11;11!UBERON:0004457;5.05e-09;9!UBERON:0000042;5.05e-09;9!UBERON:0002199;5.89e-07;46!UBERON:0002416;5.89e-07;46!UBERON:0003104;9.19e-07;7!UBERON:0009142;9.19e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.16e-13,6;UBERON:0002358,1.16e-13,6;UBERON:0003684,1.16e-13,6;UBERON:0001178,1.16e-13,6;UBERON:0000310,1.13e-12,10;UBERON:0001443,1.71e-11,11;UBERON:0002097,2.20e-08,41;UBERON:0002384,1.42e-07,371;UBERON:0002199,2.63e-07,46;UBERON:0002416,2.63e-07,46;UBERON:0004457,7.30e-07,12;UBERON:0000042,7.30e-07,12 | |||
|phase1_expression=1.09007027562334,4.92431204949261,1.69145284915165,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,0.869079113764942,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64619665163954,0,1.14734648299525,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.505008341862199,0,0.277064115484183,0.438977620880838,0.919463387397059,0,0,2.69084453533293,1.06778694409284,0.211931901159562,1.20036438433761,0.206105058476878,1.8034837803194,0.37223371266318,1.5189869901714,1.16924406193438,2.01947019395292,0.828449087780694,0.484938170456436,3.55009592516614,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0.482022059766964,0.110293972732394,0,0.237270619111097,0.269662616320329,0,1.15424147083917,0,0,0,0,2.53510069643662,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0.1466765716419,0.387815147273333,0,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,1.67737398844108,1.14861935834114,0,0.723906533337896,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.788512075169673,0.468565659970853,0.300946099727719,0,0,1.32845119707087,0.368738337083406,0.695068915744663,0,0,0,0,0,0,0,0,1.48864684691266,4.14347327877769,3.92924132206303,1.92208723883551,0.511707249066704,4.98647155545183,0,0.616838775210622,0.710246901252508,0,0.519254429183621,0.116210378459959,0.483437798366489,0.200506470303285,0.0920809889358963,0.68888668898764,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0,0.356128142586949,0.165284915360978,0,0,0.10115778085555,1.39453664789186,2.20368642781448,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.136499911407986,0.848432591722276,1.13008116620243,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0.35667105148125,0,0.844430541190656,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0.284136146806413,1.19372242368845,0.296964680832639,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,2.17727711363265,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0.341380344856499,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0.0870592065804026,0.17472666824203,0,0.387025325156341,0.146178634172371,0.410577285266046,0.290967049465258,0,0,0.137041924646751,0,0.0633107959558787,1.36885967914362,0,0,0,0,0,0,0.288109595976299,0,0.235694034616795,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.201550417460179,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,1.0062716070103,0.889811221596536,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,2.80019435264208,1.03018711554838,0.336749488765919,0,0,0.857766365499703,0,0.226705925512272,0.463044948647668,0,0.537266523244462,0.926404341482917,0,0.353378291891762,0,0,0,0.690860683462397,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0.368211900503681,0.139879507719444,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0.318004350653419,0.0788617450012534,0,1.05802783107205,0.6124909547064,0.0642292250964595,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,1.14640342257068,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,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| ||
|short_description=p@chr13:76416984..76416995,+ | |short_description=p@chr13:76416984..76416995,+ | ||
}} | }} |
Latest revision as of 17:09, 24 July 2015
Short description: | p@chr13:76416984..76416995, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:76416984..76416995, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.55e-16 | 3 |
skin fibroblast | 9.87e-13 | 23 |
fibroblast | 1.24e-11 | 76 |
adipocyte of breast | 5.00e-11 | 2 |
preadipocyte | 1.01e-10 | 12 |
omentum preadipocyte | 5.64e-08 | 3 |
fat cell | 6.83e-08 | 15 |
mesenchymal cell | 1.61e-07 | 354 |
adipocyte of omentum tissue | 2.35e-07 | 3 |
connective tissue cell | 3.04e-07 | 361 |
multi fate stem cell | 5.03e-07 | 427 |
somatic stem cell | 7.93e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.16e-13 | 6 |
peritoneum | 1.16e-13 | 6 |
abdominal cavity | 1.16e-13 | 6 |
visceral peritoneum | 1.16e-13 | 6 |
breast | 1.13e-12 | 10 |
chest | 1.71e-11 | 11 |
skin of body | 2.20e-08 | 41 |
connective tissue | 1.42e-07 | 371 |
integument | 2.63e-07 | 46 |
integumental system | 2.63e-07 | 46 |
cavity lining | 7.30e-07 | 12 |
serous membrane | 7.30e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.99e-09 | 5 |
myotonic disease | 1.99e-09 | 5 |
muscle tissue disease | 1.99e-09 | 5 |
myopathy | 1.99e-09 | 5 |
muscular disease | 1.99e-09 | 5 |
myotonic dystrophy | 1.99e-09 | 5 |