FFCP PHASE1:Hg19::chr11:122051243..122051257,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:122051243..122051257,-
|short_description=p3@ENST00000533109
|description=CAGE_peak_3_at_ENST00000533109_5end
|association_with_transcript=-135bp_to_ENST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-135bp_to_ENST00000533109_5end | |||
|cluster_id=chr11:122051243..122051257,- | |||
|coexpression_cluster_id=C1617 | |||
|description=CAGE_peak_3_at_ENST00000533109_5end | |||
|id=chr11:122051243..122051257,- | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-45!180;CL:0000057!3.07e-28!75;CL:0000680!3.42e-20!57;CL:0000056!3.42e-20!57;CL:0000355!3.42e-20!57;CL:0000187!8.78e-19!54;CL:0000548!4.17e-18!679;CL:0000004!4.17e-18!679;CL:0000255!4.17e-18!679;CL:0000012!1.64e-17!682;CL:0000144!2.07e-17!625;CL:0000222!2.16e-17!119;CL:0000183!2.54e-17!59;CL:0002371!1.00e-15!591;CL:0000393!8.42e-15!60;CL:0000211!8.42e-15!60;CL:0000192!2.42e-14!42;CL:0000514!2.42e-14!42;CL:0000220!5.36e-14!246;CL:0002321!1.58e-13!248;CL:0002620!2.14e-12!23;CL:0000003!6.58e-12!722;CL:0000359!2.27e-11!32;CL:0000723!3.25e-07!436;CL:0000048!3.69e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.90e-14;23!CL:0000057;3.90e-13;73!CL:0000359;2.79e-12;32!CL:0000187;8.97e-12;55!CL:0000192;1.18e-11;43!CL:0000393;3.55e-09;61!CL:0000211;3.55e-09;61!CL:0002320;9.19e-08;188!CL:0002494;3.32e-07;16!CL:0000134;9.33e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.24e-30,76;CL:0000680,4.55e-22,58;CL:0000056,4.55e-22,58;CL:0000355,4.55e-22,58;CL:0000187,1.90e-20,55;CL:0000393,1.13e-16,61;CL:0000211,1.13e-16,61;CL:0000192,5.85e-16,43;CL:0000514,5.85e-16,43;CL:0000222,2.52e-14,121;CL:0002620,2.52e-14,23;CL:0000359,5.61e-13,32;CL:0000048,5.35e-12,427;CL:0000723,1.70e-11,433;CL:0000034,2.01e-10,441;CL:0002321,2.20e-10,250;CL:0002494,4.28e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;8.01e-12;58!CL:0000514;1.18e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!3.79e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.35e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.29e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.12e-25!83;UBERON:0002329!7.12e-25!83;UBERON:0003077!7.12e-25!83;UBERON:0003059!7.12e-25!83;UBERON:0007282!7.12e-25!83;UBERON:0009618!7.12e-25!83;UBERON:0007285!7.12e-25!83;UBERON:0004290!3.22e-21!70;UBERON:0000486!8.06e-21!82;UBERON:0001134!5.02e-18!61;UBERON:0002036!5.02e-18!61;UBERON:0003082!5.02e-18!61;UBERON:0002385!9.75e-17!63;UBERON:0001015!9.75e-17!63;UBERON:0000383!9.75e-17!63;UBERON:0005256!6.10e-15!143;UBERON:0002049!3.35e-14!79;UBERON:0007798!3.35e-14!79;UBERON:0000475!6.47e-13!365;UBERON:0001637!1.79e-12!42;UBERON:0003509!1.79e-12!42;UBERON:0004572!1.79e-12!42;UBERON:0000490!2.13e-12!138;UBERON:0003102!2.59e-12!95;UBERON:0004872!7.64e-12!84;UBERON:0004535!2.20e-11!110;UBERON:0002100!3.57e-11!216;UBERON:0004573!1.53e-10!33;UBERON:0004571!1.53e-10!33;UBERON:0000119!1.89e-10!312;UBERON:0001009!1.94e-10!113;UBERON:0001981!3.24e-10!60;UBERON:0007500!3.24e-10!60;UBERON:0004537!3.24e-10!60;UBERON:0006965!3.24e-10!60;UBERON:0000055!6.29e-10!69;UBERON:0002097!7.34e-10!40;UBERON:0002199!1.06e-09!45;UBERON:0002416!1.06e-09!45;UBERON:0000483!1.33e-09!309;UBERON:0003914!2.10e-08!118;UBERON:0000481!2.27e-07!347;UBERON:0000947!5.46e-07!21;UBERON:0010191!5.46e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.42e-10;33!UBERON:0004571;1.42e-10;33!UBERON:0001637;1.58e-09;42!UBERON:0003509;1.58e-09;42!UBERON:0004572;1.58e-09;42!UBERON:0002097;7.42e-08;41!UBERON:0002385;1.41e-07;31!UBERON:0001015;1.41e-07;31!UBERON:0000383;1.41e-07;31!UBERON:0000947;2.15e-07;21!UBERON:0010191;2.15e-07;21!UBERON:0002384;5.44e-07;198!UBERON:0002199;7.51e-07;46!UBERON:0002416;7.51e-07;46!UBERON:0000075;9.91e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.96e-22,71;UBERON:0003059,1.96e-22,71;UBERON:0007282,1.96e-22,71;UBERON:0004290,1.96e-22,71;UBERON:0009618,1.96e-22,71;UBERON:0003077,8.17e-22,72;UBERON:0007285,8.17e-22,72;UBERON:0007524,3.25e-21,73;UBERON:0000486,1.02e-20,83;UBERON:0001134,2.16e-19,62;UBERON:0002036,2.16e-19,62;UBERON:0003082,2.16e-19,62;UBERON:0007503,1.79e-18,78;UBERON:0002385,3.41e-18,64;UBERON:0001015,3.41e-18,64;UBERON:0000383,3.41e-18,64;UBERON:0000490,1.07e-13,148;UBERON:0001637,4.15e-13,42;UBERON:0003509,4.15e-13,42;UBERON:0004572,4.15e-13,42;UBERON:0005256,5.32e-12,122;UBERON:0002049,1.65e-11,78;UBERON:0007798,1.65e-11,78;UBERON:0004573,1.88e-11,33;UBERON:0004571,1.88e-11,33;UBERON:0003102,9.79e-11,99;UBERON:0004872,3.92e-10,83;UBERON:0004535,4.45e-10,109;UBERON:0003104,4.63e-10,160;UBERON:0009142,4.63e-10,160;UBERON:0002097,4.69e-10,41;UBERON:0001009,2.52e-09,112;UBERON:0002199,3.75e-09,46;UBERON:0002416,3.75e-09,46;UBERON:0007500,3.00e-08,59;UBERON:0001981,3.00e-08,59;UBERON:0004537,3.00e-08,59;UBERON:0006965,3.00e-08,59;UBERON:0000947,2.44e-07,21;UBERON:0010191,2.44e-07,21;UBERON:0000055,2.51e-07,68;UBERON:0002100,5.99e-07,199;UBERON:0000119,6.92e-07,309;UBERON:0000075,8.88e-07,16 | |||
|phase1_expression=0.908391896352783,1.07050261945492,3.52386010239928,0,0.446961094427288,1.74467704820074,0,1.89515962028049,0.261185628199839,4.91467873003018,0,0,0,14.9757287081656,2.31978163009541,5.3786011716142,3.01347264011988,1.46062018077475,3.90346239032406,1.84681587115182,3.67201244239655,0,1.43117993565528,3.42186062682211,1.25542639594803,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.40648818027883,1.44575660953827,1.50401373190767,1.44846518960824,6.36228757640879,3.89307896242109,3.59232305223458,4.87804674417641,2.98638271356629,0,1.09288586487763,0,0,0,0,0,0,0,2.58391129576717,1.72046919021225,1.73570250803797,3.39184765154406,2.09749718104953,0.550236083880135,1.04497483268405,0.516833518338658,1.06729878806013,0.66944122552934,0,0,0,0,0.81014194788176,1.25019619597712,0.44905874525234,0.337834441449967,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,10.4364109856017,11.6500070731413,56.5387202072444,18.9312169694217,3.90135220418193,5.60677600142307,8.5399196583764,2.71334303258876,11.2035972743916,4.58016285036939,3.59616186849609,1.66493170409425,1.72852777344,6.32667865951251,3.1216007683032,3.4228309292667,1.19558944441441,17.2628713006334,8.7411389958791,10.1124580825619,42.4640676210178,23.7070232411712,20.7684820163289,2.37600571456411,5.68713937340681,4.55080680969013,6.46756327634615,21.8836948140286,24.7734669346489,34.6330144355229,10.5354629011401,16.5503409731471,2.85452311922534,2.49550802952046,17.2214050261307,9.1829677191984,9.32500365102072,9.90300617078528,10.8205155700361,13.6549486224183,9.67807652924267,12.8270012503362,4.67697624773753,7.32057945307932,9.02089006694534,6.30419621593366,5.68015348026583,3.62707553619505,6.27374191548804,0.386521706326594,4.09119180886252,1.14721838155602,0,0,0,0,0,0,3.12899064659632,0.643240938192885,2.76269842704961,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.34800898104545,0.219500570817251,2.24803506515239,0.301586917234893,0.648119116109707,3.58389135841357,3.11980435583874,12.9898207822746,1.04337364477569,3.99189560401794,0.288732895522148,0,0,0,0,0,0,0,1.87467667973554,1.17587489739202,0.992425680696705,4.56748465784526,2.90633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0.616964956219941,0,0,9.75540433804638,3.48768055066624,14.2276274492643,5.04159691455333,3.57656445851882,3.381211010224,3.19125739901845,0,4.62973273671856,5.67396528093113,2.93064396917709,2.43062589218851,1.08524321078289,1.64648067356154,5.86325131728723,0.355391948742546,0,9.64606006590676,8.71533458600294,4.99864955910285,0,0,0,17.7322393063771,9.18895486672911,5.70547620162874,4.05387658669222,5.95881335396112,5.72995082367666,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,8.22032994518237,15.50528615285,6.51036056879365,15.8057854763413,27.4780642747629,12.3007883726469,23.7797072435208,3.61135319673263,0,1.03473071292505,3.98535359121262,0.553107505625109,4.95236602468072,0.783204629850962,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,7.69134204238208,5.06424511850606,3.36792113319688,7.68834895534206,6.14048698880044,2.89537058058494,5.93672265779964,0.462629081407967,2.30830242907065,0.9033987161519,3.63478100428535,0,0,0.601519410909855,0,6.8888668898764,4.73437036817464,3.8026080338233,0,0.539107359730903,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0.647747748306418,0,0.812839312631559,0,0.254876273045038,0,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0.27470839445503,1.32015199872941,1.14853107599234,1.30012049207304,19.2820715812991,7.54031602678551,11.707694900713,5.52613229014066,5.78913604435028,7.19715640617433,3.91545073568417,5.19882427238216,0.534192213880424,0.826424576804891,1.15314040419064,5.23212121227795,0,1.39453664789186,11.0184321390724,2.0911118104818,4.31247012246524,1.06461206063404,4.34966496037536,2.03856641014312,10.4481167321654,5.58237554039501,24.0448362786232,2.66882271493355,1.535386747868,2.56763392820352,5.72765846266686,3.92474320099615,2.87795932133304,4.39259247577688,4.3590588867904,4.04364963146632,1.58510321173008,1.26377536871694,0.975267478179181,2.92456187557541,3.16950440270266,2.32049849393576,2.54529777516683,6.78048699721457,4.41092274836899,1.32687795048244,3.06915619677634,4.05142873986681,3.9353685122798,4.8698490471049,1.8589409885985,1.69017361519345,3.01163839628508,3.34046739444612,1.78335525740625,7.44998234548255,0,0.658589785919804,6.83051712778287,7.69856384538962,4.42621718537356,0,0,0,0.86101074534246,0,1.33029046061003,8.04031900724358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,7.90291805662632,0,1.47787785689595,1.19548792950642,0,0,2.65898574505602,0,18.0402960843848,5.30223271769228,0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| ||
|short_description=p3@ENST00000533109 | |||
}} | }} |
Latest revision as of 19:17, 23 July 2015
Short description: | p3@ENST00000533109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000533109_5end |
Coexpression cluster: | C1617_Fibroblast_meningioma_giant_Smooth_mesenchymal_hepatic_Olfactory |
Association with transcript: | -135bp_to_ENST00000533109_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.24e-30 | 76 |
muscle precursor cell | 4.55e-22 | 58 |
myoblast | 4.55e-22 | 58 |
multi-potent skeletal muscle stem cell | 4.55e-22 | 58 |
muscle cell | 1.90e-20 | 55 |
electrically responsive cell | 1.13e-16 | 61 |
electrically active cell | 1.13e-16 | 61 |
smooth muscle cell | 5.85e-16 | 43 |
smooth muscle myoblast | 5.85e-16 | 43 |
mesodermal cell | 2.52e-14 | 121 |
skin fibroblast | 2.52e-14 | 23 |
vascular associated smooth muscle cell | 5.61e-13 | 32 |
multi fate stem cell | 5.35e-12 | 427 |
somatic stem cell | 1.70e-11 | 433 |
stem cell | 2.01e-10 | 441 |
embryonic cell | 2.20e-10 | 250 |
cardiocyte | 4.28e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.29e-08 | 14 |