FFCP PHASE1:Hg19::chr11:125495862..125495882,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:125495862..125495882,+
|short_description=p1@CHEK1
|description=CAGE_peak_1_at_CHEK1_5end
|association_with_transcript=0bp_to_ENST00000428830,ENST00000528...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1111 | |EntrezGene=1111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1925 | |HGNC=1925 | ||
|UniProt=O14757, | |TSSclassifier=strong | ||
|UniProt=O14757,F5H7S4 | |||
|association_with_transcript=0bp_to_ENST00000428830,ENST00000528761,ENST00000532449,ENST00000544373_5end | |||
|cluster_id=chr11:125495862..125495882,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_CHEK1_5end | |||
|id=chr11:125495862..125495882,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.95e-17!254;CL:0000012!1.85e-10!682;CL:0000548!4.27e-10!679;CL:0000004!4.27e-10!679;CL:0000255!4.27e-10!679;CL:0002319!9.43e-08!25;CL:0000133!4.26e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.72e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.58e-17,253;CL:0002319,6.74e-08,25;CL:0000133,3.58e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.31e-60!235;DOID:14566!4.86e-60!239;DOID:0050686!5.64e-31!137;DOID:0050687!9.31e-30!143;DOID:2531!5.52e-25!51;DOID:0060083!5.52e-25!51;DOID:305!6.32e-24!106;DOID:1240!2.14e-20!39;DOID:8692!3.70e-16!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.23e-16;39!DOID:8692;4.45e-16;31!DOID:2531;7.08e-16;51!DOID:0060083;7.08e-16;51!DOID:305;3.94e-08;106!DOID:0050686;5.23e-08;137!DOID:14566;7.47e-08;239!DOID:162;2.47e-07;235!DOID:0050687;2.58e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.57e-62,235;DOID:14566,5.28e-61,239;DOID:0050686,1.02e-31,137;DOID:0050687,4.05e-30,143;DOID:2531,9.46e-26,51;DOID:0060083,9.46e-26,51;DOID:305,1.51e-24,106;DOID:1240,5.19e-21,39;DOID:8692,1.24e-16,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,1.04474251279935,5.6518805395347,1.39560233594486,4.15038607047327,2.37390280405608,0.990130823680373,0,3.36162573225888,0.602694528023977,0.730310090387373,0.487932798790507,7.26414242653049,4.48801520737357,0.313454721478088,23.7575869318777,19.7099172104953,27.1172101524774,31.8643901968957,31.0340228120795,31.6417340880991,0,0,0.77408061658038,5.51652734687356,3.91567694411725,1.10926203050036,32.3038226419858,23.8844310578868,26.7176399794711,0,0,0.217010870715852,0.223915474239924,0.971680998056939,0.77272670290256,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.382273228125229,1.32171328579026,3.92355994087075,27.391944816608,0.393419540227666,0.393010762749165,0.616804496998528,5.18278135711102,0.32592226663359,0,0,8.35578426638802,0.883817722424512,1.55073726208535,0.270803863765016,7.81357050326618,7.54344215847294,9.37296056240954,9.67225062250469,12.7513357723423,0.14828656316206,0,0,18.3561135170057,0,0.34362744548263,0.759059076058509,0.318565414324097,0,0,1.05402583354441,0.76791966692651,1.24930726552346,0.710331756132051,1.64225599384209,0,0.534880391567015,0.144824403882799,0,3.35350429851818,3.32442660793179,9.39741796199872,0.50133791063589,0.579386075843295,9.54343136461319,0.486634870302636,16.6381278208759,5.98669373148923,5.97276542713257,1.5062593682237,1.45718115317017,1.85392221392215,0.324547393654683,0,0.26591592103773,0,0,0.371457501329565,7.55297147993479,2.58070378531837,4.16568601929113,2.82653970962005,2.09749718104953,6.05259692268148,5.01587919688345,3.35941786920128,1.77883131343355,6.35969164252873,1.61131726843659,3.04108842287405,2.4406205754817,7.35326160691737,0.81014194788176,17.4134470153956,13.4717623575702,11.7115939702655,9.19899824795299,4.74632829784064,4.39684185432977,0,3.87780264148325,1.74437620857014,1.49091585508596,6.96467814155189,0.529636723252875,3.44203944898576,5.67469411517371,2.24271040056923,1.06748995729705,1.48000529050296,5.60179863719579,3.77189881795127,11.1154094117152,1.96764655938411,0,3.04617861383936,1.24864030732128,3.99330275081114,1.49448680551801,23.8392032246843,15.0541838262362,17.8372524511856,3.0623125688234,13.0204376350474,1.75653827998801,2.37600571456411,0.989067717114227,1.82032272387605,0,19.0219808768095,17.516592782075,8.58898758000967,6.58466431321257,2.14541457059314,1.80285670687916,12.3641079644423,12.0191055911538,0.85422955527427,2.54318281391474,6.60200411385685,6.49230934202165,2.06112432036503,1.48893485065272,9.45147460551091,8.47701944902428,5.04867548488229,1.74894807420369,3.39456719319505,4.9701342952326,11.2842350014957,6.10418132317755,3.47869535693934,8.45512973831587,4.58887352622406,35.1284273653235,40.9516984113389,26.9569947457283,21.3541773331663,31.0354646577023,29.1981887260664,4.69348596989448,1.28648187638577,2.76269842704961,0.928735856063958,0.721879481669586,18.5741676062555,20.2301628093722,20.003915480329,19.8529150918309,20.2627883005938,23.9643325302208,20.3595275321848,20.407032373036,21.1610936320515,3.69077727312324,2.80483547606892,0.4115740113314,0,0,0,0.590789906681404,55.624350526246,30.7471096357784,6.51957679134397,1.42675371031213,3.37205259772859,12.3650636066306,13.8882667737794,1.62904152655162,3.11980435583874,2.88662684050547,5.79652024875384,1.17408694235822,3.89789408954899,4.1668696131895,6.08813287150714,4.74122638775565,3.43394464837949,1.23108503043699,3.04205544681009,5.49935300468294,0.93733833986777,3.35964256397719,8.3647307373008,15.5831829502956,13.0785272331283,6.51750554580859,6.40462209264727,3.96217953059517,0.414656231081544,0.288239906833923,0.37872730027914,19.8113430191567,3.05590740446622,3.51652341630141,0,23.6503233217644,12.3140653716006,4.57322292208925,7.84917590417525,2.1798003441664,18.7012628843423,0.129271715757778,0,12.67954128834,1.59562869950922,1.04007436911366,4.37252536245642,2.83698264046557,4.52917704327369,2.14466990487221,0,0.823240336780769,12.7037111874557,1.06617584622764,9.50342247520115,0.301439377059586,0,2.29937879718731,0,0.502257091432126,0,2.39624855491583,0,4.27910715122155,3.32997005335432,3.90405012845728,8.41586527227509,14.5710687191585,0.394061520403854,1.07813787429759,0.513372145118994,20.0734753135746,14.3153839243384,12.3726210044431,11.056073512067,7.65526501983796,0,0,0,0.49076596687656,0.500170521059677,0.813795071099207,0.831883446123229,1.42743191037729,0.315404830067869,2.22568688486155,0,0,0,9.29915837949611,5.7154442247928,5.47366771148922,0.783204629850962,0,0.413536052245775,0.431428401637234,0.640365346820666,3.63753085735511,8.32177197552485,4.83824469327489,0,1.99500565274481,1.40330047216537,0.128139149255701,0.511707249066704,0.321707842287215,0,7.55627499633012,2.48586415438378,7.06293541718759,2.59627214591811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| ||
|short_description=p1@CHEK1 | |||
}} | }} |
Latest revision as of 13:21, 16 September 2015
Short description: | p1@CHEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHEK1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000428830, ENST00000528761, ENST00000532449, ENST00000544373_5end |
EntrezGene: | CHEK1 |
HGNC: | 1925 |
UniProt: | O14757F5H7S4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.58e-17 | 253 |
neural cell | 6.74e-08 | 25 |
neurectodermal cell | 3.58e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.57e-62 | 235 |
disease of cellular proliferation | 5.28e-61 | 239 |
organ system cancer | 1.02e-31 | 137 |
cell type cancer | 4.05e-30 | 143 |
hematologic cancer | 9.46e-26 | 51 |
immune system cancer | 9.46e-26 | 51 |
carcinoma | 1.51e-24 | 106 |
leukemia | 5.19e-21 | 39 |
myeloid leukemia | 1.24e-16 | 31 |